RNA–Protein interactions for RNA: ENST00000486060.1

CCHCR1-214, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-214ENST00000486060 FOXP2O15409 715 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 PEX10O60683 326 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 OSBPP22059 807 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 HOXA7P31268 230 aaPredicted RBP19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 ZYXQ15942 572 aaKnown RBP19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 PLEKHM2Q8IWE5 1019 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 ANKRD13CQ8N6S4 541 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 SWAP70Q9UH65 585 aa19.98■□□□□ 0.79
CCHCR1-214ENST00000486060 KIF22Q14807 665 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 SBK1Q52WX2 424 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 USP17L2Q6R6M4 530 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 CCDC129Q6ZRS4 1044 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 SMCR8Q8TEV9 937 aaPredicted RBP19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 C12orf42Q96LP6 360 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 P2RX7Q99572 595 aaKnown RBP19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 CABP5Q9NP86 173 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 TMOD4Q9NZQ9 345 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 PNMA3Q9UL41 463 aa19.97■□□□□ 0.79
CCHCR1-214ENST00000486060 GIMAP6Q6P9H5 292 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 ARMC5Q96C12 935 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 EVI5LQ96CN4 794 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 KIAA1683Q9H0B3 1180 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 ARPP21Q9UBL0 812 aaPredicted RBP19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 SRRDQ9UH36 339 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 GABRQQ9UN88 632 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
CCHCR1-214ENST00000486060 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.79
CCHCR1-214ENST00000486060 MPHOSPH10O00566 681 aaKnown RBP19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 ARHGEF6Q15052 776 aa19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 KIAA1755Q5JYT7 1200 aa19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 TXNRD2Q9NNW7 524 aa19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 TAOK2Q9UL54 1235 aa19.95■□□□□ 0.78
CCHCR1-214ENST00000486060 PATL2C9JE40 543 aaKnown RBP19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 FMNL1O95466 1100 aaPredicted RBP19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 GNRH1P01148 92 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 PABPC4Q13310 644 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 FAM110CQ1W6H9 321 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 TMEM179Q6ZVK1 233 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 IFNL3Q8IZI9 196 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 DDRGK1Q96HY6 314 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 FEZ1Q99689 392 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 OSBPL3Q9H4L5 887 aa19.94■□□□□ 0.78
CCHCR1-214ENST00000486060 MINDY4BA8MYZ0 360 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 GNAT2P19087 354 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 VCAM1P19320 739 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 RASA1P20936 1047 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 PDE4AP27815 886 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 GCLCP48506 637 aaPredicted RBP19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 HERVK_113P62684 666 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 PRKCZQ05513 592 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 SH3TC2Q8TF17 1288 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 FAM227BQ96M60 508 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 RBPJLQ9UBG7 517 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 MORF4L1Q9UBU8 362 aa19.93■□□□□ 0.78
CCHCR1-214ENST00000486060 A0A0D9SFI3 127 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 POTEFA5A3E0 1075 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 FCGRTP55899 365 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 IRX3P78415 501 aaPredicted RBP19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 VPS53Q5VIR6 699 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 ZNF333Q96JL9 665 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 CCDC17Q96LX7 622 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 MYPNQ86TC9 1320 aa19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 ZNFX1Q9P2E3 1918 aaKnown RBP19.92■□□□□ 0.78
CCHCR1-214ENST00000486060 PDE4DIPQ5VU43 2346 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 APPP05067 770 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 TDO2P48775 406 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 USP14P54578 494 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 PRMT2P55345 433 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 Q3C1V9 767 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 CATSPERGQ6ZRH7 1159 aa19.91■□□□□ 0.78
CCHCR1-214ENST00000486060 LAMA4Q16363 1823 aa19.9■□□□□ 0.78
CCHCR1-214ENST00000486060 CNMDO75829 334 aa19.9■□□□□ 0.78
CCHCR1-214ENST00000486060 SLC9C1Q4G0N8 1177 aa19.9■□□□□ 0.78
CCHCR1-214ENST00000486060 TACC3Q9Y6A5 838 aa19.9■□□□□ 0.78
CCHCR1-214ENST00000486060 USP17L15C9J2P7 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L13C9JLJ4 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L11C9JVI0 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L18D6R9N7 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L22D6RA61 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L17D6RBQ6 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L19D6RCP7 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L20D6RJB6 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 HOXD10P28358 340 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 FLT3LGP49771 235 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 ICA1Q05084 483 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 USP17L24Q0WX57 530 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 NMIQ13287 307 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 ZNF589Q86UQ0 364 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 RPAP3Q9H6T3 665 aaPredicted RBP19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 HELLSQ9NRZ9 838 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 TMX2Q9Y320 296 aa19.89■□□□□ 0.77
CCHCR1-214ENST00000486060 TRIM6-TRIM34B2RNG4 842 aa19.88■□□□□ 0.77
CCHCR1-214ENST00000486060 TNPO2O14787 897 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-214ENST00000486060 PRDM1O75626 825 aa19.88■□□□□ 0.77
CCHCR1-214ENST00000486060 EEF2P13639 858 aaKnown RBP19.88■□□□□ 0.77
CCHCR1-214ENST00000486060 RILPL2Q969X0 211 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms