RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 ID3Q02535 119 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 COL9A2Q14055 689 aaPredicted RBP7.04□□□□□ -1.28
SPTA1-207ENST00000485680 PKN1Q16512 942 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 PPM1JQ5JR12 505 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 CYFIP1Q7L576 1253 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 FERD3LQ96RJ6 166 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 SRRTQ9BXP5 876 aaKnown RBP7.04□□□□□ -1.28
SPTA1-207ENST00000485680 SNCAIPQ9Y6H5 919 aa7.04□□□□□ -1.28
SPTA1-207ENST00000485680 PEG3Q9GZU2 1588 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 NFICP08651 508 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 ETFBP38117 255 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 HNRNPUQ00839 825 aaKnown RBP eCLIP7.03□□□□□ -1.28
SPTA1-207ENST00000485680 KRTAP19-4Q3LI73 84 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 FBXW10Q5XX13 1052 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 KSR1Q8IVT5 923 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 REXO1Q8N1G1 1221 aaKnown RBP7.03□□□□□ -1.28
SPTA1-207ENST00000485680 CPLX3Q8WVH0 158 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 TMEM40Q8WWA1 233 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 ANAPC16Q96DE5 110 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 ZNF408Q9H9D4 720 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 DISC1Q9NRI5 854 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 CRIM1Q9NZV1 1036 aa7.03□□□□□ -1.28
SPTA1-207ENST00000485680 HTR3BO95264 441 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 GRK4P32298 578 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 ERVK-24P63145 666 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 RING1Q06587 406 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 CILP2Q8IUL8 1156 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 FAM168AQ92567 244 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 SHDQ96IW2 340 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 ANTXR1Q9H6X2 564 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 EHMT1Q9H9B1 1298 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 ZNRF3Q9ULT6 936 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 CCDC88BA6NC98 1476 aa7.02□□□□□ -1.29
SPTA1-207ENST00000485680 SYNGAP1Q96PV0 1343 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 SMARCA2P51531 1590 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 LOC105371045A0A1W2PR82 267 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 STK10O94804 968 aaKnown RBP7.01□□□□□ -1.29
SPTA1-207ENST00000485680 ZNF865P0CJ78 1059 aaPredicted RBP7.01□□□□□ -1.29
SPTA1-207ENST00000485680 NTF4P34130 210 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 BNIP3Q12983 259 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 MAP7Q14244 749 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 SEZ6L2Q6UXD5 910 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 DYMQ7RTS9 669 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 UBE3DQ7Z6J8 389 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 STK11IPQ8N1F8 1099 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 FAM169BQ8N8A8 192 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 SEMA6CQ9H3T2 930 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 PICK1Q9NRD5 415 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 REV1Q9UBZ9 1251 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 STRIP2Q9ULQ0 834 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 ACTL7BQ9Y614 415 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 PRR36Q9H6K5 1346 aa7.01□□□□□ -1.29
SPTA1-207ENST00000485680 DNAJA2O60884 412 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 ATE1O95260 518 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 NEFMP07197 916 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 HCLS1P14317 486 aaPredicted RBP7□□□□□ -1.29
SPTA1-207ENST00000485680 PLCG1P19174 1290 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 EIF6P56537 245 aaKnown RBP7□□□□□ -1.29
SPTA1-207ENST00000485680 ETF1P62495 437 aaKnown RBP7□□□□□ -1.29
SPTA1-207ENST00000485680 MESP2Q0VG99 397 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 TTLL4Q14679 1199 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 ZBTB37Q5TC79 503 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 PMFBP1Q8TBY8 1022 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 ARMC5Q96C12 935 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 WNT10AQ9GZT5 417 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 ACSS3Q9H6R3 686 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 C1GALT1Q9NS00 363 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 FAM105AQ9NUU6 356 aa7□□□□□ -1.29
SPTA1-207ENST00000485680 PGRP06401 933 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 RNASE1P07998 156 aaKnown RBP6.99□□□□□ -1.29
SPTA1-207ENST00000485680 FUT4P22083 530 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 GIPRP48546 466 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 RUFY4Q6ZNE9 571 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 LSRQ86X29 649 aaPredicted RBP6.99□□□□□ -1.29
SPTA1-207ENST00000485680 CRBNQ96SW2 442 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 ATXN3LQ9H3M9 355 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 FBRSQ9HAH7 460 aa6.99□□□□□ -1.29
SPTA1-207ENST00000485680 MBNL3Q9NUK0 354 aaKnown RBP6.99□□□□□ -1.29
SPTA1-207ENST00000485680 ATAD2BQ9ULI0 1458 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
SPTA1-207ENST00000485680 ASPAP45381 313 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 PDE4BQ07343 736 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 RBL2Q08999 1139 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 RNF214Q8ND24 703 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 HNRNPLLQ8WVV9 542 aaKnown RBP6.98□□□□□ -1.29
SPTA1-207ENST00000485680 ISL2Q96A47 359 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 ACSF2Q96CM8 615 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-207ENST00000485680 MISP3Q96FF7 219 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 SLC38A3Q99624 504 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 GSX1Q9H4S2 264 aaPredicted RBP6.98□□□□□ -1.29
SPTA1-207ENST00000485680 RC3H2Q9HBD1 1191 aaKnown RBP6.98□□□□□ -1.29
SPTA1-207ENST00000485680 KLHL3Q9UH77 587 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 TACC3Q9Y6A5 838 aa6.98□□□□□ -1.29
SPTA1-207ENST00000485680 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-207ENST00000485680 FANCGO15287 622 aa6.97□□□□□ -1.29
SPTA1-207ENST00000485680 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
SPTA1-207ENST00000485680 CD8BP10966 210 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms