RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, human

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSA-208	ENST00000485627	SLC44A5	Q8NCS7	719 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	ABHD8	Q96I13	439 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	PRMT6	Q96LA8	375 aa	Predicted RBP	11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	ANP32E	Q9BTT0	268 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	MYL10	Q9BUA6	226 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	SENP2	Q9HC62	589 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	TCP11L1	Q9NUJ3	509 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	RBM28	Q9NW13	759 aa	Known RBP	11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	ORC3	Q9UBD5	711 aa	Predicted RBP	11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	PI4KB	Q9UBF8	816 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	TAOK2	Q9UL54	1235 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	ZDHHC9	Q9Y397	364 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	PCDHAC2	Q9Y5I4	1007 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	GJA3	Q9Y6H8	435 aa		11.11	□□□□□ -0.63
CTSA-208	ENST00000485627	FER1L6	Q2WGJ9	1857 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	DTNB	O60941	627 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	DDAH1	O94760	285 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	DDN	O94850	711 aa	Predicted RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	BAG4	O95429	457 aa	Known RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	CTDNEP1	O95476	244 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	F13A1	P00488	732 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	AKAP17A	Q02040	695 aa	Known RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	SSRP1	Q08945	709 aa	Known RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	PPP4R3B	Q5MIZ7	849 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	CHADL	Q6NUI6	762 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	CLEC17A	Q6ZS10	378 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	TRIM22	Q8IYM9	498 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	FANCB	Q8NB91	859 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	MTMR14	Q8NCE2	650 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	NEDD1	Q8NHV4	660 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	CTCFL	Q8NI51	663 aa	Predicted RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	EHD4	Q9H223	541 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	VEZT	Q9HBM0	779 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	PRDM10	Q9NQV6	1147 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	ZNF70	Q9UC06	446 aa	Predicted RBP	11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	FAM198A	Q9UFP1	575 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	CNTNAP1	P78357	1384 aa		11.1	□□□□□ -0.63
CTSA-208	ENST00000485627	COL4A5	P29400	1685 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	CLRN2	A0PK11	232 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	TCP10L2	B9ZVM9	353 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	FZD9	O00144	591 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	NMT2	O60551	498 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	PRKCSH	P14314	528 aa	Predicted RBP	11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	KIF5B	P33176	963 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	TNNI2	P48788	182 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	CTCF	P49711	727 aa	Predicted RBP	11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	FOSB	P53539	338 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	GABPA	Q06546	454 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	MCTP1	Q6DN14	999 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	WASF1	Q92558	559 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	DPF2	Q92785	391 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	C8orf76	Q96K31	380 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	CCDC17	Q96LX7	622 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	MYOZ2	Q9NPC6	264 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	STX8	Q9UNK0	236 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	MTMR6	Q9Y217	621 aa		11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.09	□□□□□ -0.63
CTSA-208	ENST00000485627	MYH1	P12882	1939 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	NID2	Q14112	1375 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	PSME4	Q14997	1843 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	MPHOSPH10	O00566	681 aa	Known RBP	11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	PPFIA3	O75145	1194 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	IFNAR1	P17181	557 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	CDC27	P30260	824 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	GMPS	P49915	693 aa	Predicted RBP	11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	TRIM29	Q14134	588 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	FKBP1C	Q5VVH2	108 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	ZFPM1	Q8IX07	1006 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	PNMA1	Q8ND90	353 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	FAM151A	Q8WW52	585 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	ANKS1A	Q92625	1134 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	SLC26A6	Q9BXS9	759 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	STK36	Q9NRP7	1315 aa		11.08	□□□□□ -0.64
CTSA-208	ENST00000485627	DDTL	A6NHG4	134 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627		H7C1D1	291 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	HSPA8	P11142	646 aa	Known RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	NCL	P19338	710 aa	Known RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	GNAQ	P50148	359 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	ZNF280A	P59817	542 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	TNFAIP1	Q13829	316 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	CSPP1	Q1MSJ5	1256 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	CERKL	Q49MI3	558 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	RBM26	Q5T8P6	1007 aa	Known RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	CDC37L1	Q7L3B6	337 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	MICALL2	Q8IY33	904 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	PHKB	Q93100	1093 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	CSRNP1	Q96S65	589 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	MAP3K14	Q99558	947 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	ALG1	Q9BT22	464 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	IL17RB	Q9NRM6	502 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	WBP1L	Q9NX94	342 aa		11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	CNOT7	Q9UIV1	285 aa	Known RBP	11.07	□□□□□ -0.64
CTSA-208	ENST00000485627	ADAMTSL1	Q8N6G6	1762 aa		11.06	□□□□□ -0.64
CTSA-208	ENST00000485627	CCDC85C	A6NKD9	419 aa		11.06	□□□□□ -0.64
CTSA-208	ENST00000485627	WNT10B	O00744	389 aa		11.06	□□□□□ -0.64
CTSA-208	ENST00000485627	DEXI	O95424	95 aa		11.06	□□□□□ -0.64

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