RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 PAGR1Q9BTK6 254 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 METTL22Q9BUU2 404 aaPredicted RBP7.95□□□□□ -1.14
CAPN13-206ENST00000485248 FAM50BQ9Y247 325 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 ZNF536O15090 1300 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 MROH7Q68CQ1 1323 aa7.95□□□□□ -1.14
CAPN13-206ENST00000485248 A0A1B0GUL6 1792 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 MYO9BQ13459 2157 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 SNAP23O00161 211 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 TIMP1P01033 207 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 HMGCS2P54868 508 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 DSG2Q14126 1118 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 CAVIN4Q5BKX8 364 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 ANO1Q5XXA6 986 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 MFSD5Q6N075 450 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 HHIPL2Q6UWX4 724 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 UBE3BQ7Z3V4 1068 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 RNF180Q86T96 592 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 ATOH1Q92858 354 aaPredicted RBP7.94□□□□□ -1.14
CAPN13-206ENST00000485248 COL26A1Q96A83 441 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 UPF3BQ9BZI7 483 aaKnown RBP7.94□□□□□ -1.14
CAPN13-206ENST00000485248 MTCH2Q9Y6C9 303 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 GBF1Q92538 1859 aa7.94□□□□□ -1.14
CAPN13-206ENST00000485248 GYG1P46976 350 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 RIPK4P57078 832 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 ERVK-9P63128 1117 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 ERVK-24P63145 666 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 SPP2Q13103 211 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 TMEM240Q5SV17 173 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 APOBEC3HQ6NTF7 200 aaKnown RBP7.93□□□□□ -1.14
CAPN13-206ENST00000485248 HFE2Q6ZVN8 426 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 ZNF365Q70YC5 407 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 DPP9Q86TI2 863 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 FAM178BQ8IXR5 827 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 ZNF280CQ8ND82 737 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 PCMTD1Q96MG8 357 aaPredicted RBP7.93□□□□□ -1.14
CAPN13-206ENST00000485248 MRIQ9BWK5 157 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 SLC5A4Q9NY91 659 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 SUGT1Q9Y2Z0 365 aa7.93□□□□□ -1.14
CAPN13-206ENST00000485248 PHIPQ8WWQ0 1821 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 GRXCR2A6NFK2 248 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 ZBBXA8MT70 800 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 TLR3O15455 904 aaKnown RBP7.92□□□□□ -1.14
CAPN13-206ENST00000485248 SEPT4O43236 478 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 RGS20O76081 388 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 FGBP02675 491 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 ACRP10323 421 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 RARBP10826 455 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 CYP2C19P33261 490 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 HERVK_113P62684 666 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 LRRC41Q15345 812 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 KRT24Q2M2I5 525 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 PUS10Q3MIT2 529 aaKnown RBP7.92□□□□□ -1.14
CAPN13-206ENST00000485248 MORN1Q5T089 497 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 NUP133Q8WUM0 1156 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 MYH16Q9H6N6 1097 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 CD320Q9NPF0 282 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 STARD7Q9NQZ5 370 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 IQSEC3Q9UPP2 1182 aaPredicted RBP7.92□□□□□ -1.14
CAPN13-206ENST00000485248 YBX2Q9Y2T7 364 aaKnown RBP7.92□□□□□ -1.14
CAPN13-206ENST00000485248 MAP3K2Q9Y2U5 619 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 PCDHA11Q9Y5I1 949 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 SLC4A7Q9Y6M7 1214 aa7.92□□□□□ -1.14
CAPN13-206ENST00000485248 XIRP2A4UGR9 3374 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 SLC15A5A6NIM6 579 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 PHF20L1A8MW92 1017 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 CYBAP13498 195 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 CSF2RAP15509 400 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 POU3F3P20264 500 aaPredicted RBP7.91□□□□□ -1.14
CAPN13-206ENST00000485248 UBE4AQ14139 1066 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 MCM6Q14566 821 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 CCDC57Q2TAC2 916 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 LDHAL6AQ6ZMR3 332 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 PRSS33Q8NF86 280 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 USP6NLQ92738 828 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 TOX2Q96NM4 488 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 PHAXQ9H814 394 aaKnown RBP7.91□□□□□ -1.14
CAPN13-206ENST00000485248 CERS4Q9HA82 394 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 XPNPEP3Q9NQH7 507 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 USP40Q9NVE5 1235 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 FAM86C1Q9NVL1 165 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 DAGLAQ9Y4D2 1042 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 ZDBF2Q9HCK1 2354 aa7.91□□□□□ -1.14
CAPN13-206ENST00000485248 ZBED9Q6R2W3 1325 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 A0A1W2PQ45 241 aaPredicted RBP7.9□□□□□ -1.14
CAPN13-206ENST00000485248 A0A1W2PQY0 241 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 FECHP22830 423 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 RABGGTBP53611 331 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 FAAP100Q0VG06 881 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 RASIP1Q5U651 963 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 DUSP27Q5VZP5 1158 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 PTCRAQ6ISU1 281 aaPredicted RBP7.9□□□□□ -1.14
CAPN13-206ENST00000485248 CDC42EP5Q6NZY7 148 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 OTOP2Q7RTS6 562 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 CCDC84Q86UT8 332 aaPredicted RBP7.9□□□□□ -1.14
CAPN13-206ENST00000485248 ARNTL2Q8WYA1 636 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.14
CAPN13-206ENST00000485248 PPP1R12CQ9BZL4 782 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms