RNA–Protein interactions for RNA: ENST00000485142.1

EFCAB6-210, Transcript of EF-hand calcium binding domain 6, humanhuman

TSL 3

Gene EFCAB6, Length 467 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-210ENST00000485142 CWC22Q9HCG8 908 aaKnown RBP18.67■□□□□ 0.58
EFCAB6-210ENST00000485142 MCM9Q9NXL9 1143 aa18.67■□□□□ 0.58
EFCAB6-210ENST00000485142 HMGCRP04035 888 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 MAPK4P31152 587 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 ZSCAN25Q6NSZ9 544 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 C12orf42Q96LP6 360 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 P2RX7Q99572 595 aaKnown RBP18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 BOLA2Q9H3K6 86 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 CEP290O15078 2479 aa18.66■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L15C9J2P7 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L13C9JLJ4 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L11C9JVI0 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L18D6R9N7 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L22D6RA61 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L17D6RBQ6 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L19D6RCP7 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L20D6RJB6 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 FARP2O94887 1054 aaPredicted RBP18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 SGPL1O95470 568 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 USP17L24Q0WX57 530 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 ZYXQ15942 572 aaKnown RBP18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 SHROOM1Q2M3G4 852 aaPredicted RBP18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 DPF3Q92784 378 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 GPATCH3Q96I76 525 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 KIAA1683Q9H0B3 1180 aa18.65■□□□□ 0.58
EFCAB6-210ENST00000485142 TCRBV5S4A2TA0A5A2 114 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 MPHOSPH10O00566 681 aaKnown RBP18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 PLCD1P51178 756 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 CCNA1P78396 465 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 TRMT44Q8IYL2 757 aaKnown RBP18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 HAUS7Q99871 368 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 NUDT12Q9BQG2 462 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 PAGR1Q9BTK6 254 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 EMILIN3Q9NT22 766 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 SWAP70Q9UH65 585 aa18.64■□□□□ 0.57
EFCAB6-210ENST00000485142 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 SHMT1P34896 483 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 ADD2P35612 726 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 ERVK-24P63145 666 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 LCORLQ8N3X6 602 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 DEFB118Q96PH6 123 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 DCP1AQ9NPI6 582 aaPredicted RBP18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 ATP8A2Q9NTI2 1148 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 RABGAP1Q9Y3P9 1069 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 NR2E3Q9Y5X4 410 aa18.63■□□□□ 0.57
EFCAB6-210ENST00000485142 MBD4O95243 580 aa18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 HABP4Q5JVS0 413 aaKnown RBP18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 EDC3Q96F86 508 aaKnown RBP18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 ARMT1Q9H993 441 aa18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 PAK6Q9NQU5 681 aaPredicted RBP18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 GJD2Q9UKL4 321 aa18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 BAZ2AQ9UIF9 1905 aaKnown RBP18.62■□□□□ 0.57
EFCAB6-210ENST00000485142 PLXNB2O15031 1838 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 RPTORQ8N122 1335 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 VCAM1P19320 739 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 PDE4AP27815 886 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 GABPAQ06546 454 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 UBE3CQ15386 1083 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 TMEM179Q6ZVK1 233 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 SH2D4AQ9H788 454 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 TXNRD2Q9NNW7 524 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
EFCAB6-210ENST00000485142 SMARCA5O60264 1052 aaPredicted RBP18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 CYP2B6P20813 491 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 RGS2P41220 211 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 SEPT2Q15019 361 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 PLEKHH3Q7Z736 793 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 UBE2Q1Q7Z7E8 422 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 OSBPL3Q9H4L5 887 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 ECHDC1Q9NTX5 307 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
EFCAB6-210ENST00000485142 H0YGN5 161 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 ZKSCAN1P17029 563 aaPredicted RBP18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 CATSPERGQ6ZRH7 1159 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 GPR142Q7Z601 462 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 ANKLE1Q8NAG6 615 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 ACER1Q8TDN7 264 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 CCDC17Q96LX7 622 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 CRISPLD2Q9H0B8 497 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 ARHGEF10LQ9HCE6 1279 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 IVNS1ABPQ9Y6Y0 642 aa18.59■□□□□ 0.57
EFCAB6-210ENST00000485142 LRRFIP1Q32MZ4 808 aaKnown RBP18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 WDR78Q5VTH9 848 aa18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 LBX2Q6XYB7 198 aa18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 PLEKHM2Q8IWE5 1019 aa18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 TRIB2Q92519 343 aa18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 APBA2Q99767 749 aa18.58■□□□□ 0.56
EFCAB6-210ENST00000485142 TTC41PQ6P2S7 1318 aa18.57■□□□□ 0.56
EFCAB6-210ENST00000485142 ERC2O15083 957 aa18.57■□□□□ 0.56
EFCAB6-210ENST00000485142 MX1P20591 662 aa18.57■□□□□ 0.56
EFCAB6-210ENST00000485142 NECAB2Q7Z6G3 386 aa18.57■□□□□ 0.56
EFCAB6-210ENST00000485142 LPAR1Q92633 364 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms