RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
MACF1-220ENST00000485063 SPP2Q13103 211 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.91
MACF1-220ENST00000485063 TAF1CQ15572 869 aaPredicted RBP9.34□□□□□ -0.91
MACF1-220ENST00000485063 MCMDC2Q4G0Z9 681 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 SBK1Q52WX2 424 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 C12orf60Q5U649 245 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 GADL1Q6ZQY3 521 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 ANKRD23Q86SG2 305 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 PDCD7Q8N8D1 485 aaKnown RBP9.34□□□□□ -0.91
MACF1-220ENST00000485063 BRI3BPQ8WY22 251 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 SEC62Q99442 399 aaKnown RBP9.34□□□□□ -0.91
MACF1-220ENST00000485063 NAPBQ9H115 298 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 DNAJC18Q9H819 358 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 DIAPH3Q9NSV4 1193 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 TMOD4Q9NZQ9 345 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 ZBTB21Q9ULJ3 1066 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 PTPRFP10586 1907 aa9.34□□□□□ -0.91
MACF1-220ENST00000485063 CASP8AP2Q9UKL3 1982 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 A0A0G2JLL6 359 aaPredicted RBP9.33□□□□□ -0.92
MACF1-220ENST00000485063 C19orf81C9J6K1 198 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 BTBD19C9JJ37 291 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 GPR25O00155 361 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 GH2P01242 217 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 SDSP20132 328 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 PDE4AP27815 886 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 GABPAQ06546 454 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 RAB3GAP1Q15042 981 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 NOM1Q5C9Z4 860 aaKnown RBP9.33□□□□□ -0.92
MACF1-220ENST00000485063 TTC22Q5TAA0 569 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 CTR9Q6PD62 1173 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 PRRT2Q7Z6L0 340 aaPredicted RBP9.33□□□□□ -0.92
MACF1-220ENST00000485063 IFNL3Q8IZI9 196 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 FAM43AQ8N2R8 423 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 FEZ1Q99689 392 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 PTPN18Q99952 460 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 MKNK2Q9HBH9 465 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
MACF1-220ENST00000485063 USP17L10C9JJH3 530 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 PDHXO00330 501 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 FKTNO75072 461 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 CYP2D6P10635 497 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 SHMT1P34896 483 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 CDK8P49336 464 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 PDE4BQ07343 736 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 NMIQ13287 307 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 CRHR2Q13324 411 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 RRP1BQ14684 758 aaKnown RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 ARHGEF6Q15052 776 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 COL13A1Q5TAT6 717 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 ERICH6BQ5W0A0 696 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 TMEM179Q6ZVK1 233 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 C16orf86Q6ZW13 317 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 CCDC84Q86UT8 332 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 PROCA1Q8NCQ7 364 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 RUFY2Q8WXA3 655 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 DYNLL2Q96FJ2 89 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 FAM227BQ96M60 508 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 PARK7Q99497 189 aaKnown RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
MACF1-220ENST00000485063 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.32□□□□□ -0.92
MACF1-220ENST00000485063 CCDC171Q6TFL3 1326 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 CYP2D7A0A087X1C5 515 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 A0A0D9SFI3 127 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 TLR2O60603 784 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 OSBPP22059 807 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 USP14P54578 494 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 HMGCS2P54868 508 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 BACE1P56817 501 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 SP3Q02447 781 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 MTMR2Q13614 643 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 KIF22Q14807 665 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 USP17L2Q6R6M4 530 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 CWC27Q6UX04 472 aaKnown RBP9.31□□□□□ -0.92
MACF1-220ENST00000485063 CCDC129Q6ZRS4 1044 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 STK11IPQ8N1F8 1099 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 SMCR8Q8TEV9 937 aaPredicted RBP9.31□□□□□ -0.92
MACF1-220ENST00000485063 ZNF296Q8WUU4 475 aaPredicted RBP9.31□□□□□ -0.92
MACF1-220ENST00000485063 ERO1AQ96HE7 468 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 SH2D4AQ9H788 454 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 ARHGEF10LQ9HCE6 1279 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 AGTPBP1Q9UPW5 1226 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 SLC45A1Q9Y2W3 748 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 LOC285556D6RIA3 1793 aa9.31□□□□□ -0.92
MACF1-220ENST00000485063 ROBO3Q96MS0 1386 aa9.3□□□□□ -0.92
MACF1-220ENST00000485063 PSEN1P49768 467 aa9.3□□□□□ -0.92
MACF1-220ENST00000485063 PPARAQ07869 468 aa9.3□□□□□ -0.92
MACF1-220ENST00000485063 SEPT2Q15019 361 aa9.3□□□□□ -0.92
MACF1-220ENST00000485063 SLC44A5Q8NCS7 719 aa9.3□□□□□ -0.92
MACF1-220ENST00000485063 EPB41L4AQ9HCS5 686 aaPredicted RBP9.3□□□□□ -0.92
MACF1-220ENST00000485063 HSPD1P10809 573 aaKnown RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 GSPT1P15170 499 aaKnown RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
MACF1-220ENST00000485063 JAG1P78504 1218 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 ICA1Q05084 483 aa9.29□□□□□ -0.92
MACF1-220ENST00000485063 DGKZQ13574 1117 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms