RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 SPICE1Q8N0Z3 855 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 OTUD5Q96G74 571 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 GBA2Q9HCG7 927 aaPredicted RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ZHX2Q9Y6X8 837 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ATRNL1Q5VV63 1379 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 MYH1P12882 1939 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 RXRAP19793 462 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ECE1P42892 770 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 NEK4P51957 841 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 RASGRP2Q7LDG7 609 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 C2orf69Q8N8R5 385 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 NCOA7Q8NI08 942 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 CEP95Q96GE4 821 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 IL17RBQ9NRM6 502 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 HERC5Q9UII4 1024 aaKnown RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ISY1Q9ULR0 285 aaKnown RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 SSC5DA1L4H1 1573 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 CDK5RAP2Q96SN8 1893 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 CAP2P40123 477 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 TATDN1Q6P1N9 297 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 STAG1Q8WVM7 1258 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ANP32BQ92688 251 aaKnown RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ESR2Q92731 530 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ZNF341Q9BYN7 854 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 RNF41Q9H4P4 317 aaPredicted RBP6.31□□□□□ -1.4
CNTN4-216ENST00000484686 CLIP2Q9UDT6 1046 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 ANAPC4Q9UJX5 808 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 PPP2R3BQ9Y5P8 575 aa6.31□□□□□ -1.4
CNTN4-216ENST00000484686 IREB2P48200 963 aaKnown RBP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 SPP2Q13103 211 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 GSE1Q14687 1217 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 SAPCD2Q86UD0 394 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 CCDC144CPQ8IYA2 1237 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 LRRC47Q8N1G4 583 aaKnown RBP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ACER1Q8TDN7 264 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 KIF2CQ99661 725 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 UBAC1Q9BSL1 405 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 MYL10Q9BUA6 226 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 EHD4Q9H223 541 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ZNF287Q9HBT7 754 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 CABP5Q9NP86 173 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 PICK1Q9NRD5 415 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 CSADQ9Y600 493 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ECM29Q5VYK3 1845 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 IFIT3O14879 490 aaKnown RBP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 IRF6O14896 467 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 PRC1O43663 620 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ANTXR2P58335 489 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 MAP3K9P80192 1104 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 PPP4R3BQ5MIZ7 849 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 BLOC1S2Q6QNY1 142 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ARMC9Q7Z3E5 817 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 RBM46Q8TBY0 533 aaKnown RBP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ARID3AQ99856 593 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 SWAP70Q9UH65 585 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 ZBTB21Q9ULJ3 1066 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 HTTP42858 3142 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 MKI67P46013 3256 aaKnown RBP6.3□□□□□ -1.4
CNTN4-216ENST00000484686 TNKSO95271 1327 aa6.3□□□□□ -1.4
CNTN4-216ENST00000484686 A0A1W2PRG0 241 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CTNND1O60716 968 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ECM2O94769 699 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 EEF2P13639 858 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 GUCY1A2P33402 732 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 MCM5P33992 734 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 PSEN1P49768 467 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ZNF157P51786 506 aaPredicted RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 STK3Q13188 491 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 IQCA1Q86XH1 822 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ANKRD13AQ8IZ07 590 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CCDC82Q8N4S0 544 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 OPTNQ96CV9 577 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 FEZ1Q99689 392 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 KRT23Q9C075 422 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CNNM2Q9H8M5 875 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ZMYM6O95789 1325 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 PASKQ96RG2 1323 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 TBC1D12O60347 775 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CD2BP2O95400 341 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ASNSP08243 561 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 PTPRAP18433 802 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 ICA1Q05084 483 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 MTMR2Q13614 643 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 TMEM67Q5HYA8 995 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 CYP4F22Q6NT55 531 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 NFXL1Q6ZNB6 911 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 Q6ZUG5 572 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 RUFY3Q7L099 469 aa6.29□□□□□ -1.4
CNTN4-216ENST00000484686 DHX32Q7L7V1 743 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 METTL16Q86W50 562 aaKnown RBP6.29□□□□□ -1.4
CNTN4-216ENST00000484686 SIAH1Q8IUQ4 282 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms