RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MYCP01106 439 aaPredicted RBP14.73□□□□□ -0.05
MSH5-216ENST00000484309 APPP05067 770 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 OSBPP22059 807 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 CDK8P49336 464 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 IRX3P78415 501 aaPredicted RBP14.73□□□□□ -0.05
MSH5-216ENST00000484309 LRRFIP1Q32MZ4 808 aaKnown RBP14.73□□□□□ -0.05
MSH5-216ENST00000484309 USP17L2Q6R6M4 530 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 CCDC129Q6ZRS4 1044 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
MSH5-216ENST00000484309 HTTP42858 3142 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 MYPNQ86TC9 1320 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 COL11A1P12107 1806 aaPredicted RBP14.72□□□□□ -0.05
MSH5-216ENST00000484309 MINDY4BA8MYZ0 360 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 TDO2P48775 406 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 FCGRTP55899 365 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 ZMYM1Q5SVZ6 1142 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 C16orf86Q6ZW13 317 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 CHD1LQ86WJ1 897 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 SH3TC2Q8TF17 1288 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
MSH5-216ENST00000484309 RLFQ13129 1914 aa14.72□□□□□ -0.05
MSH5-216ENST00000484309 NUCB1Q02818 461 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 PRKCZQ05513 592 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 SLC9C1Q4G0N8 1177 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 EVI5LQ96CN4 794 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 P2RX7Q99572 595 aaKnown RBP14.71□□□□□ -0.05
MSH5-216ENST00000484309 SRRDQ9UH36 339 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 GABRQQ9UN88 632 aa14.71□□□□□ -0.05
MSH5-216ENST00000484309 A0A1W2PRG0 241 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 TNPO2O14787 897 aaKnown RBP14.7□□□□□ -0.06
MSH5-216ENST00000484309 HERVK_113P62684 666 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 FAM110CQ1W6H9 321 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 TMEM179Q6ZVK1 233 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 PLEKHM2Q8IWE5 1019 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 RAET1EQ8TD07 263 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 KIAA1683Q9H0B3 1180 aa14.7□□□□□ -0.06
MSH5-216ENST00000484309 GNRH1P01148 92 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 GNAT2P19087 354 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 VCAM1P19320 739 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 HOXA7P31268 230 aaPredicted RBP14.69□□□□□ -0.06
MSH5-216ENST00000484309 GCLCP48506 637 aaPredicted RBP14.69□□□□□ -0.06
MSH5-216ENST00000484309 USP14P54578 494 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 ATP2B2Q01814 1243 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 MLLT1Q03111 559 aaPredicted RBP14.69□□□□□ -0.06
MSH5-216ENST00000484309 ICA1Q05084 483 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 IFNL3Q8IZI9 196 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 ARMC5Q96C12 935 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 PAGR1Q9BTK6 254 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 TXNRD2Q9NNW7 524 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 TAOK2Q9UL54 1235 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 ROBO3Q96MS0 1386 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 A0A0G2JMZ2 1700 aa14.69□□□□□ -0.06
MSH5-216ENST00000484309 A0A0D9SFI3 127 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 POTEFA5A3E0 1075 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 PATL2C9JE40 543 aaKnown RBP14.68□□□□□ -0.06
MSH5-216ENST00000484309 PRDM1O75626 825 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 HOXD10P28358 340 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 RGS19P49795 217 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 PRMT2P55345 433 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 KIAA1755Q5JYT7 1200 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 ZNF333Q96JL9 665 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 FAM227BQ96M60 508 aa14.68□□□□□ -0.06
MSH5-216ENST00000484309 RPAP3Q9H6T3 665 aaPredicted RBP14.68□□□□□ -0.06
MSH5-216ENST00000484309 PDE4DIPQ5VU43 2346 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L15C9J2P7 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L13C9JLJ4 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L11C9JVI0 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L18D6R9N7 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L22D6RA61 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L17D6RBQ6 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L19D6RCP7 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L20D6RJB6 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 RASA1P20936 1047 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 USP17L24Q0WX57 530 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 NMIQ13287 307 aaPredicted RBP14.67□□□□□ -0.06
MSH5-216ENST00000484309 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 POTEEQ6S8J3 1075 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 SIAH1Q8IUQ4 282 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 SPICE1Q8N0Z3 855 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 CCDC17Q96LX7 622 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 NAPBQ9H115 298 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 MKNK2Q9HBH9 465 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 ARHGEF10LQ9HCE6 1279 aa14.67□□□□□ -0.06
MSH5-216ENST00000484309 LAMA4Q16363 1823 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 CENPFP49454 3210 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 FOXP2O15409 715 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
MSH5-216ENST00000484309 ELNP15502 786 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 GRK4P32298 578 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 FLT3LGP49771 235 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
MSH5-216ENST00000484309 CATSPERGQ6ZRH7 1159 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 NBPF11Q86T75 865 aa14.66□□□□□ -0.06
MSH5-216ENST00000484309 COA7Q96BR5 231 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms