RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 KIR3DL1P43629 444 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 PRR23BQ6ZRT6 265 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 HID1Q8IV36 788 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 ZSCAN29Q8IWY8 852 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-211ENST00000484178 ZSCAN18Q8TBC5 510 aaPredicted RBP6.61□□□□□ -1.35
SSBP1-211ENST00000484178 GAL3ST3Q96A11 431 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 PLPPR2Q96GM1 343 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 C12orf49Q9H741 205 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
SSBP1-211ENST00000484178 SPG7Q9UQ90 795 aa6.61□□□□□ -1.35
SSBP1-211ENST00000484178 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 PTPN11Q06124 597 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-211ENST00000484178 NKG7Q16617 165 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 MPZL3Q6UWV2 235 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 SYDE1Q6ZW31 735 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-211ENST00000484178 ANKLE2Q86XL3 938 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 FBXO15Q8NCQ5 510 aaPredicted RBP6.6□□□□□ -1.35
SSBP1-211ENST00000484178 FRMD6Q96NE9 622 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 ASB16Q96NS5 453 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 ALPK1Q96QP1 1244 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 MIPEPQ99797 713 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 RAPGEFL1Q9UHV5 662 aa6.6□□□□□ -1.35
SSBP1-211ENST00000484178 AQRO60306 1485 aaKnown RBP eCLIP6.6□□□□□ -1.354e-9■□□□□ 8.1
SSBP1-211ENST00000484178 CCER2I3L3R5 266 aa6.59□□□□□ -1.35
SSBP1-211ENST00000484178 CST3P01034 146 aaPredicted RBP6.59□□□□□ -1.35
SSBP1-211ENST00000484178 MAPK8P45983 427 aa6.59□□□□□ -1.35
SSBP1-211ENST00000484178 RPS26P62854 115 aaKnown RBP6.59□□□□□ -1.35
SSBP1-211ENST00000484178 FGD1P98174 961 aa6.59□□□□□ -1.35
SSBP1-211ENST00000484178 CDKAL1Q5VV42 579 aa6.59□□□□□ -1.35
SSBP1-211ENST00000484178 LETMD1Q6P1Q0 360 aa6.59□□□□□ -1.35
SSBP1-211ENST00000484178 PIWIL2Q8TC59 973 aaKnown RBP6.59□□□□□ -1.35
SSBP1-211ENST00000484178 SETD5Q9C0A6 1442 aa6.59□□□□□ -1.36
SSBP1-211ENST00000484178 PRAMEF27A3QJZ7 478 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 H3BS24 57 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 CYP7A1P22680 504 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 LCNL1Q6ZST4 164 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 TMPRSS7Q7RTY8 843 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 LRRC56Q8IYG6 542 aaPredicted RBP6.58□□□□□ -1.36
SSBP1-211ENST00000484178 RIN3Q8TB24 985 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 EFCAB5A4FU69 1503 aa6.58□□□□□ -1.36
SSBP1-211ENST00000484178 GFRA2O00451 464 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 USP17L7P0C7H9 530 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 ATP2B2Q01814 1243 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 ERICH6BQ5W0A0 696 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.57□□□□□ -1.36
SSBP1-211ENST00000484178 SETDB2Q96T68 719 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 ARHGAP35Q9NRY4 1499 aa6.57□□□□□ -1.36
SSBP1-211ENST00000484178 CUX1P39880 1505 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 NFIBO00712 420 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 C1QTNF9P0C862 333 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 ERCC3P19447 782 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 ETF1P62495 437 aaKnown RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 WIPI1Q5MNZ9 446 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 PRAMEF13Q5VWM6 474 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 DNAJC14Q6Y2X3 702 aaPredicted RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 MRPL41Q8IXM3 137 aaKnown RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 UBE2FQ969M7 185 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 WWC3Q9ULE0 1092 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 SUPT16HQ9Y5B9 1047 aaKnown RBP6.56□□□□□ -1.36
SSBP1-211ENST00000484178 TIAM1Q13009 1591 aa6.56□□□□□ -1.36
SSBP1-211ENST00000484178 ZSCAN22P10073 491 aaPredicted RBP6.55□□□□□ -1.36
SSBP1-211ENST00000484178 SRFP11831 508 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 TNK2Q07912 1038 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 CD320Q9NPF0 282 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 USP35Q9P2H5 1018 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 PRDM2Q13029 1718 aa6.55□□□□□ -1.36
SSBP1-211ENST00000484178 LRRC9Q6ZRR7 1453 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 FYCO1Q9BQS8 1478 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 ESR1P03372 595 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 RAC2P15153 192 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 GLDCP23378 1020 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 GRK4P32298 578 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 ABHD4Q8TB40 342 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 NSUN3Q9H649 340 aaKnown RBP6.54□□□□□ -1.36
SSBP1-211ENST00000484178 KIAA1522Q9P206 1035 aaPredicted RBP6.54□□□□□ -1.36
SSBP1-211ENST00000484178 TMEM59LQ9UK28 342 aa6.54□□□□□ -1.36
SSBP1-211ENST00000484178 CBX7O95931 251 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 HPXP02790 462 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 CDK8P49336 464 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 SLC6A19Q695T7 634 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 TTC6Q86TZ1 520 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 TTF2Q9UNY4 1162 aaKnown RBP6.53□□□□□ -1.36
SSBP1-211ENST00000484178 CARMIL1Q5VZK9 1371 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 RAB3GAP2Q9H2M9 1393 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 CADPSQ9ULU8 1353 aa6.53□□□□□ -1.36
SSBP1-211ENST00000484178 FMN1Q68DA7 1419 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 HMGB1P09429 215 aaKnown RBP6.52□□□□□ -1.37
SSBP1-211ENST00000484178 TMEM253P0C7T8 217 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 ETV3P41162 512 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 GAB4Q2WGN9 574 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 AGMOQ6ZNB7 445 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 TTLL10Q6ZVT0 673 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 DIRC2Q96SL1 478 aa6.52□□□□□ -1.37
SSBP1-211ENST00000484178 EPB41L4BQ9H329 900 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms