RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 CAP1Q01518 475 aa22.77■■□□□ 1.24
PKD1-217ENST00000483814 KIF22Q14807 665 aa22.77■■□□□ 1.24
PKD1-217ENST00000483814 PKN2Q16513 984 aaKnown RBP22.77■■□□□ 1.24
PKD1-217ENST00000483814 USP17L2Q6R6M4 530 aa22.77■■□□□ 1.24
PKD1-217ENST00000483814 TMEM179Q6ZVK1 233 aa22.77■■□□□ 1.24
PKD1-217ENST00000483814 MGAMO43451 1857 aa22.77■■□□□ 1.24
PKD1-217ENST00000483814 SDSP20132 328 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 OSBPP22059 807 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 LACTBP83111 547 aaPredicted RBP22.76■■□□□ 1.23
PKD1-217ENST00000483814 MCMDC2Q4G0Z9 681 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 VPS53Q5VIR6 699 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 TICAM2Q86XR7 235 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 CCDC17Q96LX7 622 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 ARHGAP39Q9C0H5 1083 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 MKNK2Q9HBH9 465 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 EMILIN3Q9NT22 766 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 ROBO3Q96MS0 1386 aa22.76■■□□□ 1.23
PKD1-217ENST00000483814 CCDC85CA6NKD9 419 aa22.75■■□□□ 1.23
PKD1-217ENST00000483814 CLEC10AQ8IUN9 316 aa22.75■■□□□ 1.23
PKD1-217ENST00000483814 FOXP2O15409 715 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 BCRP11274 1271 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 USP14P54578 494 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 IRX3P78415 501 aaPredicted RBP22.74■■□□□ 1.23
PKD1-217ENST00000483814 ARHGEF6Q15052 776 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 FBXO46Q6PJ61 603 aaPredicted RBP22.74■■□□□ 1.23
PKD1-217ENST00000483814 KIAA1683Q9H0B3 1180 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 ASCC2Q9H1I8 757 aaPredicted RBP22.74■■□□□ 1.23
PKD1-217ENST00000483814 DIAPH3Q9NSV4 1193 aa22.74■■□□□ 1.23
PKD1-217ENST00000483814 PRDM1O75626 825 aa22.73■■□□□ 1.23
PKD1-217ENST00000483814 ICA1Q05084 483 aa22.73■■□□□ 1.23
PKD1-217ENST00000483814 TTC22Q5TAA0 569 aa22.73■■□□□ 1.23
PKD1-217ENST00000483814 ZNF589Q86UQ0 364 aaPredicted RBP22.73■■□□□ 1.23
PKD1-217ENST00000483814 HPS5Q9UPZ3 1129 aa22.73■■□□□ 1.23
PKD1-217ENST00000483814 GREB1LQ9C091 1923 aaPredicted RBP22.72■■□□□ 1.23
PKD1-217ENST00000483814 A0A1W2PRG0 241 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 GSPT1P15170 499 aaKnown RBP22.72■■□□□ 1.23
PKD1-217ENST00000483814 RASA1P20936 1047 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 HOXA7P31268 230 aaPredicted RBP22.72■■□□□ 1.23
PKD1-217ENST00000483814 ATP2B2Q01814 1243 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 PPARAQ07869 468 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 CWC27Q6UX04 472 aaKnown RBP22.72■■□□□ 1.23
PKD1-217ENST00000483814 ANKRD13CQ8N6S4 541 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 C12orf42Q96LP6 360 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 CCDC171Q6TFL3 1326 aa22.72■■□□□ 1.23
PKD1-217ENST00000483814 SLC3A2P08195 630 aaKnown RBP22.71■■□□□ 1.23
PKD1-217ENST00000483814 PSMC4P43686 418 aa22.71■■□□□ 1.23
PKD1-217ENST00000483814 ZNF287Q9HBT7 754 aa22.71■■□□□ 1.23
PKD1-217ENST00000483814 ARHGEF10LQ9HCE6 1279 aa22.71■■□□□ 1.23
PKD1-217ENST00000483814 PTPN22Q9Y2R2 807 aa22.71■■□□□ 1.23
PKD1-217ENST00000483814 MYH4Q9Y623 1939 aa22.7■■□□□ 1.23
PKD1-217ENST00000483814 HIP1O00291 1037 aa22.7■■□□□ 1.22
PKD1-217ENST00000483814 FMNL1O95466 1100 aaPredicted RBP22.7■■□□□ 1.22
PKD1-217ENST00000483814 VCAM1P19320 739 aa22.7■■□□□ 1.22
PKD1-217ENST00000483814 CTGFP29279 349 aa22.7■■□□□ 1.22
PKD1-217ENST00000483814 GCLCP48506 637 aaPredicted RBP22.7■■□□□ 1.22
PKD1-217ENST00000483814 ZNF444Q8N0Y2 327 aaPredicted RBP22.7■■□□□ 1.22
PKD1-217ENST00000483814 TRIM47Q96LD4 638 aa22.7■■□□□ 1.22
PKD1-217ENST00000483814 P2RX7Q99572 595 aaKnown RBP22.7■■□□□ 1.22
PKD1-217ENST00000483814 NEFLP07196 543 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 HSPD1P10809 573 aaKnown RBP22.69■■□□□ 1.22
PKD1-217ENST00000483814 CTDSPL2Q05D32 466 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 PDE4BQ07343 736 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 CENPQQ7L2Z9 268 aaPredicted RBP22.69■■□□□ 1.22
PKD1-217ENST00000483814 SIAH1Q8IUQ4 282 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 KANSL2Q9H9L4 492 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 DOCK3Q8IZD9 2030 aa22.69■■□□□ 1.22
PKD1-217ENST00000483814 USP17L15C9J2P7 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L13C9JLJ4 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L11C9JVI0 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L18D6R9N7 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L22D6RA61 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L17D6RBQ6 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L19D6RCP7 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L20D6RJB6 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 EEF2P13639 858 aaKnown RBP22.68■■□□□ 1.22
PKD1-217ENST00000483814 MFAP1P55081 439 aaKnown RBP22.68■■□□□ 1.22
PKD1-217ENST00000483814 HERVK_113P62684 666 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 USP17L24Q0WX57 530 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.68■■□□□ 1.22
PKD1-217ENST00000483814 RPAP3Q9H6T3 665 aaPredicted RBP22.68■■□□□ 1.22
PKD1-217ENST00000483814 SH2D4AQ9H788 454 aa22.68■■□□□ 1.22
PKD1-217ENST00000483814 FGAP02671 866 aa22.67■■□□□ 1.22
PKD1-217ENST00000483814 FCGRTP55899 365 aa22.67■■□□□ 1.22
PKD1-217ENST00000483814 ALX1Q15699 326 aa22.67■■□□□ 1.22
PKD1-217ENST00000483814 FAM110CQ1W6H9 321 aa22.67■■□□□ 1.22
PKD1-217ENST00000483814 TMX2Q9Y320 296 aa22.67■■□□□ 1.22
PKD1-217ENST00000483814 RAD21O60216 631 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 PEX10O60683 326 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 GNRH1P01148 92 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 CATSPERGQ6ZRH7 1159 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 SPICE1Q8N0Z3 855 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 PTCH2Q9Y6C5 1203 aa22.66■■□□□ 1.22
PKD1-217ENST00000483814 TSPY3P0CV98 308 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 TSPY8P0CW00 308 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 HOXD10P28358 340 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 FAM47AQ5JRC9 791 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 KIAA1755Q5JYT7 1200 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 PAGR1Q9BTK6 254 aa22.65■■□□□ 1.22
PKD1-217ENST00000483814 TANGO6Q9C0B7 1094 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms