RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 POLR3EQ9NVU0 708 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 SCN9AQ15858 1988 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 C10orf71Q711Q0 1435 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 MYH15Q9Y2K3 1946 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 DEXIO95424 95 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 MMP1P03956 469 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 PLCG2P16885 1265 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 RBM10P98175 930 aaKnown RBP10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 NFIAQ12857 509 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 TMTC3Q6ZXV5 915 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 CKAP2LQ8IYA6 745 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 STAG2Q8N3U4 1231 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 EYA3Q99504 573 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 SUGT1Q9Y2Z0 365 aa10.24□□□□□ -0.77
CDC42SE1-204ENST00000483763 DCAF8L1A6NGE4 600 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ECE2O60344 883 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 DDAH1O94760 285 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 TSPY3P0CV98 308 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 TSPY8P0CW00 308 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 TOB1P50616 345 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 CACNB3P54284 484 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 SF3A1Q15459 793 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ANO1Q5XXA6 986 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 CDC42EP5Q6NZY7 148 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 C16orf86Q6ZW13 317 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 DGKHQ86XP1 1220 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 CCAR1Q8IX12 1150 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 DIS3L2Q8IYB7 885 aaKnown RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZNF444Q8N0Y2 327 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 MAP3K14Q99558 947 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ADAMTSL1Q8N6G6 1762 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 YDJCA8MPS7 323 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 MARCKSP29966 332 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 TRIM29Q14134 588 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 PPP2R5BQ15173 497 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 AXDND1Q5T1B0 1012 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 CERS3Q8IU89 383 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 TTLL6Q8N841 843 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 PNMA1Q8ND90 353 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 ENGASEQ8NFI3 743 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 PIBF1Q8WXW3 757 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 NUP62CLQ9H1M0 184 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 USP40Q9NVE5 1235 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 STX8Q9UNK0 236 aa10.23□□□□□ -0.77
CDC42SE1-204ENST00000483763 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 A0A1B0GVL5 298 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 ADAMTS3O15072 1205 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 SPTLC2O15270 562 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 PTPAQ15257 358 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 NPY5RQ15761 445 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 DDX60LQ5H9U9 1706 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 EARS2Q5JPH6 523 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 STRIP1Q5VSL9 837 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 NOSTRINQ8IVI9 506 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 AMOTL1Q8IY63 956 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 ANKS1AQ92625 1134 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 TMEM47Q9BQJ4 181 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 MTMR7Q9Y216 660 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 NAV1Q8NEY1 1877 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 LETM1O95202 739 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 YEATS4O95619 227 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CALM1P0DP23 149 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CALM2P0DP24 149 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CALM3P0DP25 149 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 BRD2P25440 801 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CRKP46108 304 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 GABPAQ06546 454 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 KIAA2012Q0VF49 1180 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 STK38Q15208 465 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 NOM1Q5C9Z4 860 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 ADALQ6DHV7 355 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 HHIPL2Q6UWX4 724 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 WASF1Q92558 559 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 TEKT1Q969V4 418 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 TNMDQ9H2S6 317 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 CLSTN2Q9H4D0 955 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 KAT14Q9H8E8 782 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 TCP11L1Q9NUJ3 509 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 DLEC1Q9Y238 1755 aa10.22□□□□□ -0.77
CDC42SE1-204ENST00000483763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 CYTH3O43739 400 aa10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 NDUFA8P51970 172 aa10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 GNL2Q13823 731 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 SLC39A14Q15043 492 aa10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 RBM43Q6ZSC3 357 aaKnown RBP10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 ERCC4Q92889 916 aaPredicted RBP10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 CEP95Q96GE4 821 aa10.21□□□□□ -0.77
CDC42SE1-204ENST00000483763 CPVLQ9H3G5 476 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms