RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 EMILIN3Q9NT22 766 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 MYPNQ86TC9 1320 aa16.64■□□□□ 0.25
VARS-225ENST00000482996 BAZ2AQ9UIF9 1905 aaKnown RBP16.63■□□□□ 0.25
VARS-225ENST00000482996 CYP2D7A0A087X1C5 515 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 CDK8P49336 464 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 ZYXQ15942 572 aaKnown RBP16.63■□□□□ 0.25
VARS-225ENST00000482996 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 RAET1EQ8TD07 263 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 ACER1Q8TDN7 264 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 GTF3C2Q8WUA4 911 aaPredicted RBP16.63■□□□□ 0.25
VARS-225ENST00000482996 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
VARS-225ENST00000482996 KIAA0100Q14667 2235 aaKnown RBP16.62■□□□□ 0.25
VARS-225ENST00000482996 M0R2C6 588 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 TNPO2O14787 897 aaKnown RBP16.62■□□□□ 0.25
VARS-225ENST00000482996 APPP05067 770 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 GUCY1A2P33402 732 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 TDO2P48775 406 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 COA7Q96BR5 231 aa16.62■□□□□ 0.25
VARS-225ENST00000482996 P2RX7Q99572 595 aaKnown RBP16.62■□□□□ 0.25
VARS-225ENST00000482996 ZSWIM8A7E2V4 1837 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L15C9J2P7 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L13C9JLJ4 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L11C9JVI0 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L18D6R9N7 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L22D6RA61 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L17D6RBQ6 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L19D6RCP7 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L20D6RJB6 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 IGHDP01880 384 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 HERVK_113P62684 666 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 USP17L24Q0WX57 530 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 ZMYM1Q5SVZ6 1142 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 ZNF333Q96JL9 665 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 TMEM106CQ9BVX2 250 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 NACAP1Q9BZK3 213 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
VARS-225ENST00000482996 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 PATL2C9JE40 543 aaKnown RBP16.6■□□□□ 0.25
VARS-225ENST00000482996 AKR1B1P15121 316 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 NUCB1Q02818 461 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 PRKCZQ05513 592 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 ARHGEF10LQ9HCE6 1279 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 MORF4L1Q9UBU8 362 aa16.6■□□□□ 0.25
VARS-225ENST00000482996 SMIM22K7EJ46 135 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 VCAM1P19320 739 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 GRK4P32298 578 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 ICA1Q05084 483 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 TICAM2Q86XR7 235 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 GPRC5AQ8NFJ5 357 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 SH3TC2Q8TF17 1288 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 SEC62Q99442 399 aaKnown RBP16.59■□□□□ 0.25
VARS-225ENST00000482996 MKNK2Q9HBH9 465 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 ZNF287Q9HBT7 754 aa16.59■□□□□ 0.25
VARS-225ENST00000482996 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
VARS-225ENST00000482996 TRIM6-TRIM34B2RNG4 842 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 FLT3LGP49771 235 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 CATSPERGQ6ZRH7 1159 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 CCAR1Q8IX12 1150 aaKnown RBP16.58■□□□□ 0.24
VARS-225ENST00000482996 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 SLAIN1Q8ND83 568 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 NAPBQ9H115 298 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 KANSL2Q9H9L4 492 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 BIN2Q9UBW5 565 aaPredicted RBP16.58■□□□□ 0.24
VARS-225ENST00000482996 GABRQQ9UN88 632 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 MYH8P13535 1937 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 CENPFP49454 3210 aa16.58■□□□□ 0.24
VARS-225ENST00000482996 MGAMO43451 1857 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 ROBO3Q96MS0 1386 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 A0A1W2PRG0 241 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 SLC3A2P08195 630 aaKnown RBP16.57■□□□□ 0.24
VARS-225ENST00000482996 IRX6P78412 446 aaPredicted RBP16.57■□□□□ 0.24
VARS-225ENST00000482996 ATP2B2Q01814 1243 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 LPAR1Q92633 364 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 PAGR1Q9BTK6 254 aa16.57■□□□□ 0.24
VARS-225ENST00000482996 RPAP3Q9H6T3 665 aaPredicted RBP16.57■□□□□ 0.24
VARS-225ENST00000482996 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 ADCY3O60266 1144 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 MYCP01106 439 aaPredicted RBP16.56■□□□□ 0.24
VARS-225ENST00000482996 ERVK-9P63128 1117 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 ERVK-24P63145 666 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 UBXN2AP68543 259 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 IRF5Q13568 498 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 STK11IPQ8N1F8 1099 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 HELLSQ9NRZ9 838 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 TMX2Q9Y320 296 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 RABGAP1Q9Y3P9 1069 aa16.56■□□□□ 0.24
VARS-225ENST00000482996 RASA1P20936 1047 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 MAPK4P31152 587 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 CCNA1P78396 465 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
VARS-225ENST00000482996 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
VARS-225ENST00000482996 PXYLP1Q8TE99 480 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms