RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 C16orf86Q6ZW13 317 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 NBPF11Q86T75 865 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 EVI5LQ96CN4 794 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 C12orf42Q96LP6 360 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 LNPKQ9C0E8 428 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 SRRDQ9UH36 339 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
HMGN1-213ENST00000482192 MYPNQ86TC9 1320 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 GSG1L2A8MUP6 293 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 M0R2C6 588 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 GUCY1A2P33402 732 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 CDK8P49336 464 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 ZYXQ15942 572 aaKnown RBP14.24□□□□□ -0.13
HMGN1-213ENST00000482192 SBK1Q52WX2 424 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 CHD1LQ86WJ1 897 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 CCDC17Q96LX7 622 aa14.24□□□□□ -0.13
HMGN1-213ENST00000482192 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
HMGN1-213ENST00000482192 APPP05067 770 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 TDO2P48775 406 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 NUCB1Q02818 461 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 ZMYM1Q5SVZ6 1142 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 ACER1Q8TDN7 264 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 NACAP1Q9BZK3 213 aa14.23□□□□□ -0.13
HMGN1-213ENST00000482192 ROBO3Q96MS0 1386 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 PATL2C9JE40 543 aaKnown RBP14.22□□□□□ -0.13
HMGN1-213ENST00000482192 SMIM22K7EJ46 135 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 AKR1B1P15121 316 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 VCAM1P19320 739 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 HERVK_113P62684 666 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 PRKCZQ05513 592 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 RAET1EQ8TD07 263 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 GTF3C2Q8WUA4 911 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-213ENST00000482192 ZNF333Q96JL9 665 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
HMGN1-213ENST00000482192 P2RX7Q99572 595 aaKnown RBP14.22□□□□□ -0.13
HMGN1-213ENST00000482192 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
HMGN1-213ENST00000482192 MORF4L1Q9UBU8 362 aa14.22□□□□□ -0.13
HMGN1-213ENST00000482192 MINDY4BA8MYZ0 360 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L15C9J2P7 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L13C9JLJ4 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L11C9JVI0 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L18D6R9N7 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L22D6RA61 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L17D6RBQ6 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L19D6RCP7 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L20D6RJB6 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 ICA1Q05084 483 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 USP17L24Q0WX57 530 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 IFNL3Q8IZI9 196 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 SH3TC2Q8TF17 1288 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 COA7Q96BR5 231 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 SH2D4AQ9H788 454 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 ZNF287Q9HBT7 754 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 ARHGEF10LQ9HCE6 1279 aa14.21□□□□□ -0.13
HMGN1-213ENST00000482192 BAZ2AQ9UIF9 1905 aaKnown RBP14.21□□□□□ -0.14
HMGN1-213ENST00000482192 A0A1W2PRG0 241 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 GRK4P32298 578 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 GPRC5AQ8NFJ5 357 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 LPAR1Q92633 364 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 OSBPL3Q9H4L5 887 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 KANSL2Q9H9L4 492 aa14.2□□□□□ -0.14
HMGN1-213ENST00000482192 TRIM6-TRIM34B2RNG4 842 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 FLT3LGP49771 235 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 IRX6P78412 446 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-213ENST00000482192 IRF5Q13568 498 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 CATSPERGQ6ZRH7 1159 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 CLEC10AQ8IUN9 316 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 PLEKHM2Q8IWE5 1019 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 SLAIN1Q8ND83 568 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 TMEM106CQ9BVX2 250 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 NAPBQ9H115 298 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
HMGN1-213ENST00000482192 MKNK2Q9HBH9 465 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 TXNRD2Q9NNW7 524 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 HELLSQ9NRZ9 838 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 RBPJLQ9UBG7 517 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 GABRQQ9UN88 632 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 TMX2Q9Y320 296 aa14.19□□□□□ -0.14
HMGN1-213ENST00000482192 SLC3A2P08195 630 aaKnown RBP14.18□□□□□ -0.14
HMGN1-213ENST00000482192 RASA1P20936 1047 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 SIAH1Q8IUQ4 282 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 PAGR1Q9BTK6 254 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 MGAMO43451 1857 aa14.18□□□□□ -0.14
HMGN1-213ENST00000482192 MYH8P13535 1937 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 RBBP6Q7Z6E9 1792 aaKnown RBP14.17□□□□□ -0.14
HMGN1-213ENST00000482192 POTEFA5A3E0 1075 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 ADCY3O60266 1144 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 EEF2P13639 858 aaKnown RBP14.17□□□□□ -0.14
HMGN1-213ENST00000482192 MAPK4P31152 587 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 ERVK-9P63128 1117 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 ERVK-24P63145 666 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 LBX2Q6XYB7 198 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 CCDC129Q6ZRS4 1044 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 CCAR1Q8IX12 1150 aaKnown RBP14.17□□□□□ -0.14
HMGN1-213ENST00000482192 PXYLP1Q8TE99 480 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 RILPL2Q969X0 211 aa14.17□□□□□ -0.14
HMGN1-213ENST00000482192 VCPKMTQ9H867 229 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms