RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 NUCB1Q02818 461 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 SLC9C1Q4G0N8 1177 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 ZMYM1Q5SVZ6 1142 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 TMEM179Q6ZVK1 233 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 C16orf86Q6ZW13 317 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 ANKRD13CQ8N6S4 541 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 TRIM47Q96LD4 638 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
OPTN-210ENST00000482140 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 TRIM6-TRIM34B2RNG4 842 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
OPTN-210ENST00000482140 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 SBK1Q52WX2 424 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 SEC62Q99442 399 aaKnown RBP17.73■□□□□ 0.43
OPTN-210ENST00000482140 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 KIAA1683Q9H0B3 1180 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 EMILIN3Q9NT22 766 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 SRRDQ9UH36 339 aa17.73■□□□□ 0.43
OPTN-210ENST00000482140 MYPNQ86TC9 1320 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 AKR1B1P15121 316 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 CTGFP29279 349 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 GUCY1A2P33402 732 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 RAET1EQ8TD07 263 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 C12orf42Q96LP6 360 aa17.72■□□□□ 0.43
OPTN-210ENST00000482140 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
OPTN-210ENST00000482140 SMIM22K7EJ46 135 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
OPTN-210ENST00000482140 ICA1Q05084 483 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 STK11IPQ8N1F8 1099 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 MKNK2Q9HBH9 465 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
OPTN-210ENST00000482140 EPB41L4AQ9HCS5 686 aaPredicted RBP17.71■□□□□ 0.43
OPTN-210ENST00000482140 USP17L15C9J2P7 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L13C9JLJ4 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L11C9JVI0 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L18D6R9N7 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L22D6RA61 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L17D6RBQ6 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L19D6RCP7 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L20D6RJB6 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 RGS19P49795 217 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 HERVK_113P62684 666 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
OPTN-210ENST00000482140 USP17L24Q0WX57 530 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 GTF3C2Q8WUA4 911 aaPredicted RBP17.7■□□□□ 0.42
OPTN-210ENST00000482140 COA7Q96BR5 231 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 ARMC5Q96C12 935 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 P2RX7Q99572 595 aaKnown RBP17.7■□□□□ 0.42
OPTN-210ENST00000482140 NAPBQ9H115 298 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 SH2D4AQ9H788 454 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 ZNF287Q9HBT7 754 aa17.7■□□□□ 0.42
OPTN-210ENST00000482140 ROBO3Q96MS0 1386 aa17.69■□□□□ 0.42
OPTN-210ENST00000482140 VCAM1P19320 739 aa17.69■□□□□ 0.42
OPTN-210ENST00000482140 ATP2B2Q01814 1243 aa17.69■□□□□ 0.42
OPTN-210ENST00000482140 PRKCZQ05513 592 aa17.69■□□□□ 0.42
OPTN-210ENST00000482140 HELLSQ9NRZ9 838 aa17.69■□□□□ 0.42
OPTN-210ENST00000482140 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
OPTN-210ENST00000482140 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 DOCK3Q8IZD9 2030 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 PAGR1Q9BTK6 254 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 RPAP3Q9H6T3 665 aaPredicted RBP17.68■□□□□ 0.42
OPTN-210ENST00000482140 MORF4L1Q9UBU8 362 aa17.68■□□□□ 0.42
OPTN-210ENST00000482140 A0A1W2PRG0 241 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 GRK4P32298 578 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 CATSPERGQ6ZRH7 1159 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 CCAR1Q8IX12 1150 aaKnown RBP17.67■□□□□ 0.42
OPTN-210ENST00000482140 ZNF444Q8N0Y2 327 aaPredicted RBP17.67■□□□□ 0.42
OPTN-210ENST00000482140 GPRC5AQ8NFJ5 357 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 ZNF333Q96JL9 665 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 TMEM106CQ9BVX2 250 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 OSBPL3Q9H4L5 887 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 KANSL2Q9H9L4 492 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 BIN2Q9UBW5 565 aaPredicted RBP17.67■□□□□ 0.42
OPTN-210ENST00000482140 GABRQQ9UN88 632 aa17.67■□□□□ 0.42
OPTN-210ENST00000482140 MYCP01106 439 aaPredicted RBP17.66■□□□□ 0.42
OPTN-210ENST00000482140 RASA1P20936 1047 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 FLT3LGP49771 235 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 PDE4BQ07343 736 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 MCMDC2Q4G0Z9 681 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 TANGO6Q9C0B7 1094 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 CWC22Q9HCG8 908 aaKnown RBP17.66■□□□□ 0.42
OPTN-210ENST00000482140 TMX2Q9Y320 296 aa17.66■□□□□ 0.42
OPTN-210ENST00000482140 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
OPTN-210ENST00000482140 ERVK-9P63128 1117 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 ERVK-24P63145 666 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 PPARAQ07869 468 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
OPTN-210ENST00000482140 SLAIN1Q8ND83 568 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 LPAR1Q92633 364 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 FAM227BQ96M60 508 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 VCPKMTQ9H867 229 aa17.65■□□□□ 0.42
OPTN-210ENST00000482140 GOPCQ9HD26 462 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms