RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 NPLOC4Q8TAT6 608 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 RNPC3Q96LT9 517 aaKnown RBP18.43■□□□□ 0.54
HDAC6-224ENST00000481929 FEZ1Q99689 392 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 HDAC5Q9UQL6 1122 aa18.43■□□□□ 0.54
HDAC6-224ENST00000481929 BAG3O95817 575 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
HDAC6-224ENST00000481929 PLCG2P16885 1265 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 TFCP2Q12800 502 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 SNX17Q15036 470 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 GORABQ5T7V8 394 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 METTL16Q86W50 562 aaKnown RBP18.42■□□□□ 0.54
HDAC6-224ENST00000481929 MAPKAPK5Q8IW41 473 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 C12orf42Q96LP6 360 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 NEUROD6Q96NK8 337 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 LRP2BPQ9P2M1 347 aa18.42■□□□□ 0.54
HDAC6-224ENST00000481929 TRIM43BA6NCK2 446 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 ZYXQ15942 572 aaKnown RBP18.41■□□□□ 0.54
HDAC6-224ENST00000481929 SH3RF1Q7Z6J0 888 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 USP38Q8NB14 1042 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 TGFBRAP1Q8WUH2 860 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 TRIM43Q96BQ3 446 aaPredicted RBP18.41■□□□□ 0.54
HDAC6-224ENST00000481929 AATFQ9NY61 560 aaKnown RBP eCLIP18.41■□□□□ 0.54
HDAC6-224ENST00000481929 RAPGEFL1Q9UHV5 662 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 FLT1P17948 1338 aa18.41■□□□□ 0.54
HDAC6-224ENST00000481929 MUC3AQ02505 3323 aa18.4■□□□□ 0.54
HDAC6-224ENST00000481929 ANO1Q5XXA6 986 aa18.4■□□□□ 0.54
HDAC6-224ENST00000481929 PALD1Q9ULE6 856 aa18.4■□□□□ 0.54
HDAC6-224ENST00000481929 GH2P01242 217 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 HLA-DOAP06340 250 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 ARID4AP29374 1257 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-224ENST00000481929 ADCYAP1R1P41586 468 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 GRIN2CQ14957 1233 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 C1orf53Q5VUE5 145 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 OLFML2BQ68BL8 750 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 NAA16Q6N069 864 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-224ENST00000481929 ATF7IPQ6VMQ6 1270 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 LBX2Q6XYB7 198 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 CATSPERGQ6ZRH7 1159 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 DPP9Q86TI2 863 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 BTBD7Q9P203 1132 aa18.39■□□□□ 0.53
HDAC6-224ENST00000481929 NCOR1O75376 2440 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 SEPT4O43236 478 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 IGHA2P01877 340 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 DNAJB2P25686 324 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 PLA2G5P39877 138 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 USP14P54578 494 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
HDAC6-224ENST00000481929 VCAM1P19320 739 aa18.37■□□□□ 0.53
HDAC6-224ENST00000481929 MCAMP43121 646 aa18.37■□□□□ 0.53
HDAC6-224ENST00000481929 PPP4CP60510 307 aa18.37■□□□□ 0.53
HDAC6-224ENST00000481929 TLE2Q04725 743 aa18.37■□□□□ 0.53
HDAC6-224ENST00000481929 SAP30BPQ9UHR5 308 aaKnown RBP18.37■□□□□ 0.53
HDAC6-224ENST00000481929 CLTBP09497 229 aa18.36■□□□□ 0.53
HDAC6-224ENST00000481929 ADORA2AP29274 412 aa18.36■□□□□ 0.53
HDAC6-224ENST00000481929 LRRC41Q15345 812 aa18.36■□□□□ 0.53
HDAC6-224ENST00000481929 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
HDAC6-224ENST00000481929 FAM122AQ96E09 287 aa18.36■□□□□ 0.53
HDAC6-224ENST00000481929 KIAA1683Q9H0B3 1180 aa18.36■□□□□ 0.53
HDAC6-224ENST00000481929 ZNF236Q9UL36 1845 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 ZNF521Q96K83 1311 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-224ENST00000481929 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-224ENST00000481929 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
HDAC6-224ENST00000481929 UQCRFS1P1P0C7P4 283 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 RAG1P15918 1043 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 ITGB8P26012 769 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 EPHB4P54760 987 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 FPGSQ05932 587 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 SMC4Q9NTJ3 1288 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 FOCADQ5VW36 1801 aa18.35■□□□□ 0.53
HDAC6-224ENST00000481929 SRGAP3O43295 1099 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 STRNO43815 780 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 FAM47AQ5JRC9 791 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 PPM1EQ8WY54 764 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 GAS2L1Q99501 681 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-224ENST00000481929 RPAP3Q9H6T3 665 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-224ENST00000481929 SLC5A4Q9NY91 659 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 THEGQ9P2T0 379 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.34■□□□□ 0.53
HDAC6-224ENST00000481929 CDK5RAP2Q96SN8 1893 aa18.34■□□□□ 0.53
HDAC6-224ENST00000481929 KIAA0355O15063 1070 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 TATDN1Q6P1N9 297 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 ADAMTS19Q8TE59 1207 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 TIFAQ96CG3 184 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 MEIS3Q99687 375 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.52
HDAC6-224ENST00000481929 PHF24Q9UPV7 400 aa18.33■□□□□ 0.52
HDAC6-224ENST00000481929 BDP1A6H8Y1 2624 aa18.32■□□□□ 0.52
HDAC6-224ENST00000481929 PRAMEF19Q5SWL8 479 aa18.32■□□□□ 0.52
HDAC6-224ENST00000481929 ACER1Q8TDN7 264 aa18.32■□□□□ 0.52
HDAC6-224ENST00000481929 ASB2Q96Q27 587 aa18.32■□□□□ 0.52
HDAC6-224ENST00000481929 SNRKQ9NRH2 765 aa18.32■□□□□ 0.52
HDAC6-224ENST00000481929 E9PSI1 815 aa18.31■□□□□ 0.52
HDAC6-224ENST00000481929 PQBP1O60828 265 aaKnown RBP18.31■□□□□ 0.52
HDAC6-224ENST00000481929 FAM9BQ8IZU0 186 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms