RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 SERPINB13Q9UIV8 391 aa14.05□□□□□ -0.16
GARNL3-217ENST00000481875 DDX60LQ5H9U9 1706 aaKnown RBP14.04□□□□□ -0.16
GARNL3-217ENST00000481875 ERVK-9P63128 1117 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 ERVK-24P63145 666 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 MAP3K12Q12852 859 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 HSP90AB4PQ58FF6 505 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 MORN1Q5T089 497 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 TTC6Q86TZ1 520 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.04□□□□□ -0.16
GARNL3-217ENST00000481875 TRIB2Q92519 343 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 RIOK1Q9BRS2 568 aaKnown RBP14.04□□□□□ -0.16
GARNL3-217ENST00000481875 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 KIAA1683Q9H0B3 1180 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 CCDC8Q9H0W5 538 aaPredicted RBP14.04□□□□□ -0.16
GARNL3-217ENST00000481875 RABGAP1Q9Y3P9 1069 aa14.04□□□□□ -0.16
GARNL3-217ENST00000481875 IDH1O75874 414 aaKnown RBP14.03□□□□□ -0.16
GARNL3-217ENST00000481875 USP14P54578 494 aa14.03□□□□□ -0.16
GARNL3-217ENST00000481875 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
GARNL3-217ENST00000481875 TTF1Q15361 905 aaPredicted RBP14.03□□□□□ -0.16
GARNL3-217ENST00000481875 Q3C1V9 767 aa14.03□□□□□ -0.16
GARNL3-217ENST00000481875 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
GARNL3-217ENST00000481875 NBPF3Q9H094 633 aa14.03□□□□□ -0.16
GARNL3-217ENST00000481875 C1orf115Q9H7X2 142 aa14.03□□□□□ -0.16
GARNL3-217ENST00000481875 USP17L15C9J2P7 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L13C9JLJ4 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L11C9JVI0 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L18D6R9N7 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L22D6RA61 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L17D6RBQ6 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L19D6RCP7 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L20D6RJB6 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 GDF11O95390 407 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 GH2P01242 217 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 GABPAQ06546 454 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 USP17L24Q0WX57 530 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 SHROOM1Q2M3G4 852 aaPredicted RBP14.02□□□□□ -0.17
GARNL3-217ENST00000481875 GPR153Q6NV75 609 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 MAGEB6Q8N7X4 407 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 SPOCK2Q92563 424 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 GDF15Q99988 308 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 ZBTB40Q9NUA8 1239 aa14.02□□□□□ -0.17
GARNL3-217ENST00000481875 SAP30BPQ9UHR5 308 aaKnown RBP14.02□□□□□ -0.17
GARNL3-217ENST00000481875 LAMA2P24043 3122 aaKnown RBP14.02□□□□□ -0.17
GARNL3-217ENST00000481875 IGHA2P01877 340 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 HOXC6P09630 235 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 COL6A1P12109 1028 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 RGS2P41220 211 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 USP5P45974 858 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 CCNA1P78396 465 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 TRIM32Q13049 653 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 CERKLQ49MI3 558 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-217ENST00000481875 GPR142Q7Z601 462 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 RPAP2Q8IXW5 612 aaPredicted RBP14.01□□□□□ -0.17
GARNL3-217ENST00000481875 DIS3LQ8TF46 1054 aaKnown RBP14.01□□□□□ -0.17
GARNL3-217ENST00000481875 PORCNQ9H237 461 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 ANTXR1Q9H6X2 564 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 RLFQ13129 1914 aa14.01□□□□□ -0.17
GARNL3-217ENST00000481875 PRKAR2AP13861 404 aaKnown RBP14□□□□□ -0.17
GARNL3-217ENST00000481875 CYP2B6P20813 491 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 SHMT1P34896 483 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
GARNL3-217ENST00000481875 AAMPQ13685 434 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 ABCB5Q2M3G0 1257 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 LHX8Q68G74 356 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 PLEKHH3Q7Z736 793 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 AACSQ86V21 672 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 MIGA1Q8NAN2 632 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 RHPN1Q8TCX5 695 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 APBA2Q99767 749 aa14□□□□□ -0.17
GARNL3-217ENST00000481875 FRMPD3Q5JV73 1810 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 CNMDO75829 334 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 GLRX3O76003 335 aaKnown RBP13.99□□□□□ -0.17
GARNL3-217ENST00000481875 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
GARNL3-217ENST00000481875 VCAM1P19320 739 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 GUCY1A2P33402 732 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 PLCD1P51178 756 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 MAP2K5Q13163 448 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 KIF1BPQ96EK5 621 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 CABP5Q9NP86 173 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 EXOC6BQ9Y2D4 811 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
GARNL3-217ENST00000481875 MYH8P13535 1937 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 MAGEB6P1A0A0J9YX57 407 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 TCRBV5S4A2TA0A5A2 114 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 SLC15A5A6NIM6 579 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 PDE6AP16499 860 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 CLASRPQ8N2M8 674 aaKnown RBP13.98□□□□□ -0.17
GARNL3-217ENST00000481875 CRNKL1Q9BZJ0 848 aaKnown RBP13.98□□□□□ -0.17
GARNL3-217ENST00000481875 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 HOXC10Q9NYD6 342 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 ZNF236Q9UL36 1845 aa13.98□□□□□ -0.17
GARNL3-217ENST00000481875 PFASO15067 1338 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 STRNO43815 780 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 PEX10O60683 326 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 RAB11FIP3O75154 756 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 PTPREP23469 700 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 GRB14Q14449 540 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 RAB3GAP1Q15042 981 aa13.97□□□□□ -0.17
GARNL3-217ENST00000481875 SLC9C2Q5TAH2 1124 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms