RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 GNAI3P08754 354 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 PPIL2Q13356 520 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 RASGRF1Q13972 1273 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 INTS3Q68E01 1043 aaKnown RBP11.13□□□□□ -0.63
HLA-B-253ENST00000481849 NEUROD6Q96NK8 337 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
HLA-B-253ENST00000481849 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
HLA-B-253ENST00000481849 CHD8Q9HCK8 2581 aa11.13□□□□□ -0.63
HLA-B-253ENST00000481849 A0A1B0GUL7 405 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 SOX1O00570 391 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-253ENST00000481849 SLURP2P0DP57 97 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 TRIM27P14373 513 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 RGS3P49796 1198 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 PPATQ06203 517 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 PICALMQ13492 652 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-253ENST00000481849 FAM160A2Q8N612 972 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-253ENST00000481849 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 PTCH2Q9Y6C5 1203 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
HLA-B-253ENST00000481849 OTOFQ9HC10 1997 aa11.12□□□□□ -0.63
HLA-B-253ENST00000481849 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 IPO8O15397 1037 aaKnown RBP11.11□□□□□ -0.63
HLA-B-253ENST00000481849 TLR2O60603 784 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 BTDP43251 543 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 RPIAP49247 311 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 KIF22Q14807 665 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 ZGPATQ8N5A5 531 aaKnown RBP11.11□□□□□ -0.63
HLA-B-253ENST00000481849 ARHGAP45Q92619 1136 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 CPA4Q9UI42 421 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 MUC6Q6W4X9 2439 aa11.11□□□□□ -0.63
HLA-B-253ENST00000481849 TMEM265A0A087WTH1 108 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 PDHXO00330 501 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 GNAI2P04899 355 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 EN2P19622 333 aaPredicted RBP11.1□□□□□ -0.63
HLA-B-253ENST00000481849 MAP2K5Q13163 448 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 MVPQ14764 893 aaKnown RBP11.1□□□□□ -0.63
HLA-B-253ENST00000481849 ARHGEF6Q15052 776 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
HLA-B-253ENST00000481849 ARMC5Q96C12 935 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 ZNF112Q9UJU3 913 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 NCOR1O75376 2440 aa11.1□□□□□ -0.63
HLA-B-253ENST00000481849 GAKO14976 1311 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 PNMA6EA0A0J9YXQ4 647 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 ENTPD3O75355 529 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 LACTBP83111 547 aaPredicted RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 MECOMQ03112 1051 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 MTX1Q13505 466 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 SPTY2D1Q68D10 685 aaPredicted RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 ERICH6Q7L0X2 663 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 ANKRD23Q86SG2 305 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 TMEM57Q8N5G2 664 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 SH3TC2Q8TF17 1288 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 IDI2Q9BXS1 227 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 DDX4Q9NQI0 724 aaKnown RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.09□□□□□ -0.63
HLA-B-253ENST00000481849 ZHX2Q9Y6X8 837 aa11.09□□□□□ -0.63
HLA-B-253ENST00000481849 CACNA1BQ00975 2339 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 CYP2C8P10632 490 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 G3BP1Q13283 466 aaKnown RBP eCLIP11.08□□□□□ -0.648e-6■□□□□ 9
HLA-B-253ENST00000481849 Q3C1V9 767 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 NOL9Q5SY16 702 aaKnown RBP11.08□□□□□ -0.64
HLA-B-253ENST00000481849 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 CCDC84Q86UT8 332 aaPredicted RBP11.08□□□□□ -0.64
HLA-B-253ENST00000481849 SCYL3Q8IZE3 742 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 SPATA5Q8NB90 893 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 ZNF333Q96JL9 665 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 PRO3102Q9H379 93 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 ZCCHC17Q9NP64 241 aaKnown RBP11.08□□□□□ -0.64
HLA-B-253ENST00000481849 PICK1Q9NRD5 415 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 RAI14Q9P0K7 980 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 KCNH4Q9UQ05 1017 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 MROH7-TTC4A0A0A0MT08 1334 aa11.08□□□□□ -0.64
HLA-B-253ENST00000481849 PDS5AQ29RF7 1337 aaKnown RBP11.08□□□□□ -0.64
HLA-B-253ENST00000481849 ATRNL1Q5VV63 1379 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 PHF20L1A8MW92 1017 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 CTGFP29279 349 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 PSMC4P43686 418 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 HNRNPUQ00839 825 aaKnown RBP eCLIP11.07□□□□□ -0.64
HLA-B-253ENST00000481849 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
HLA-B-253ENST00000481849 MOGSQ13724 837 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 ZKSCAN2Q63HK3 967 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 C17orf99Q6UX52 265 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms