RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 NYAP2Q9P242 653 aa24.42■■□□□ 1.5
VPS16-207ENST00000481812 SPDYE5A6NIY4 337 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 PPATQ06203 517 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 SHROOM1Q2M3G4 852 aaPredicted RBP24.41■■□□□ 1.5
VPS16-207ENST00000481812 ANKS1AQ92625 1134 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 TMEM87BQ96K49 555 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 AS3MTQ9HBK9 375 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 SYNPO2Q9UMS6 1093 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 MYH4Q9Y623 1939 aa24.41■■□□□ 1.5
VPS16-207ENST00000481812 CASTP20810 708 aaKnown RBP24.4■■□□□ 1.5
VPS16-207ENST00000481812 ANTXR2P58335 489 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 SART3Q15020 963 aaKnown RBP24.4■■□□□ 1.5
VPS16-207ENST00000481812 RAB3GAP1Q15042 981 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 RUFY3Q7L099 469 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 DGKHQ86XP1 1220 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 MKL1Q969V6 931 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 CEP95Q96GE4 821 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 ZSCAN10Q96SZ4 725 aaPredicted RBP24.4■■□□□ 1.5
VPS16-207ENST00000481812 KIF2CQ99661 725 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 UBAC1Q9BSL1 405 aa24.4■■□□□ 1.5
VPS16-207ENST00000481812 PRC1O43663 620 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 TTLL1O95922 423 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 RPS6KB1P23443 525 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 ICA1Q05084 483 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 FBXL16Q8N461 479 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 ELP3Q9H9T3 547 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 CYP46A1Q9Y6A2 500 aa24.39■■□□□ 1.49
VPS16-207ENST00000481812 PPIL2Q13356 520 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 SEC23AQ15436 765 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 RGMBQ6NW40 437 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 SIAH1Q8IUQ4 282 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 IGDCC4Q8TDY8 1250 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 ARHGEF10LQ9HCE6 1279 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 ABT1Q9ULW3 272 aaKnown RBP24.38■■□□□ 1.49
VPS16-207ENST00000481812 AFG3L2Q9Y4W6 797 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 ZHX2Q9Y6X8 837 aa24.38■■□□□ 1.49
VPS16-207ENST00000481812 ERICH2A1L162 156 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 COL9A3Q14050 684 aaPredicted RBP24.37■■□□□ 1.49
VPS16-207ENST00000481812 RCSD1Q6JBY9 416 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 TMTC2Q8N394 836 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 ZNF280CQ8ND82 737 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 ALDH8A1Q9H2A2 487 aaPredicted RBP24.37■■□□□ 1.49
VPS16-207ENST00000481812 SH2D4AQ9H788 454 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 PTPRFP10586 1907 aa24.37■■□□□ 1.49
VPS16-207ENST00000481812 TNKSO95271 1327 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 CXCL11O14625 94 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 IFIT3O14879 490 aaKnown RBP24.36■■□□□ 1.49
VPS16-207ENST00000481812 NMT2O60551 498 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 ZBTB48P10074 688 aaPredicted RBP24.36■■□□□ 1.49
VPS16-207ENST00000481812 EEF2P13639 858 aaKnown RBP24.36■■□□□ 1.49
VPS16-207ENST00000481812 LIFRP42702 1097 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 ENAHQ8N8S7 591 aaPredicted RBP24.36■■□□□ 1.49
VPS16-207ENST00000481812 OPTNQ96CV9 577 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 ZKSCAN3Q9BRR0 538 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 AGXT2Q9BYV1 514 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 KCNH4Q9UQ05 1017 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 TMX2Q9Y320 296 aa24.36■■□□□ 1.49
VPS16-207ENST00000481812 RASSF10A6NK89 507 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 ZNF157P51786 506 aaPredicted RBP24.35■■□□□ 1.49
VPS16-207ENST00000481812 C1QTNF8P60827 252 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 CCDC102AQ96A19 550 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 WNK4Q96J92 1243 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 KIAA1683Q9H0B3 1180 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.35■■□□□ 1.49
VPS16-207ENST00000481812 CLIP2Q9UDT6 1046 aa24.35■■□□□ 1.49
VPS16-207ENST00000481812 C19orf81C9J6K1 198 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 USP17L10C9JJH3 530 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 TOP1P11387 765 aaKnown RBP24.34■■□□□ 1.49
VPS16-207ENST00000481812 WTAPQ15007 396 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 RABEP1Q15276 862 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 TMEM67Q5HYA8 995 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 SPRYD7Q5W111 196 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 CHST3Q7LGC8 479 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 OTUD5Q96G74 571 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 STX8Q9UNK0 236 aa24.34■■□□□ 1.49
VPS16-207ENST00000481812 A0A1W2PRG0 241 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 SH2B2O14492 632 aaPredicted RBP24.33■■□□□ 1.49
VPS16-207ENST00000481812 SLC10A3P09131 477 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 CPA1P15085 419 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 USP14P54578 494 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 BACE1P56817 501 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 SPP2Q13103 211 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 SH3D19Q5HYK7 790 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 IFIT1BQ5T764 474 aaKnown RBP24.33■■□□□ 1.49
VPS16-207ENST00000481812 CCDC84Q86UT8 332 aaPredicted RBP24.33■■□□□ 1.49
VPS16-207ENST00000481812 RASAL3Q86YV0 1011 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 CLEC10AQ8IUN9 316 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 CNKSR2Q8WXI2 1034 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 UPF3BQ9BZI7 483 aaKnown RBP24.33■■□□□ 1.49
VPS16-207ENST00000481812 LY9Q9HBG7 655 aa24.33■■□□□ 1.49
VPS16-207ENST00000481812 IRF6O14896 467 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 GJA5P36382 358 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 DEFB115Q30KQ5 88 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 SGMS1Q86VZ5 419 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 ACER1Q8TDN7 264 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 TMEM47Q9BQJ4 181 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 PDRG1Q9NUG6 133 aa24.32■■□□□ 1.48
VPS16-207ENST00000481812 ECE1P42892 770 aa24.31■■□□□ 1.48
VPS16-207ENST00000481812 Q6ZUG5 572 aa24.31■■□□□ 1.48
VPS16-207ENST00000481812 HSPA6P17066 643 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms