RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CTR9Q6PD62 1173 aa20.41■□□□□ 0.86
HSPG2-209ENST00000480900 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
HSPG2-209ENST00000480900 ZNF333Q96JL9 665 aa20.41■□□□□ 0.86
HSPG2-209ENST00000480900 FSD1Q9BTV5 496 aa20.41■□□□□ 0.86
HSPG2-209ENST00000480900 ARPP21Q9UBL0 812 aaPredicted RBP20.41■□□□□ 0.86
HSPG2-209ENST00000480900 TNRC18O15417 2968 aaPredicted RBP20.4■□□□□ 0.86
HSPG2-209ENST00000480900 CYP2D7A0A087X1C5 515 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 GSG1L2A8MUP6 293 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 MPHOSPH10O00566 681 aaKnown RBP20.4■□□□□ 0.86
HSPG2-209ENST00000480900 GPAA1O43292 621 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 GNAT2P19087 354 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 PDE1AP54750 535 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 TMEM179Q6ZVK1 233 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 C16orf86Q6ZW13 317 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 MYPNQ86TC9 1320 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 CCDC17Q96LX7 622 aa20.4■□□□□ 0.86
HSPG2-209ENST00000480900 GREB1LQ9C091 1923 aaPredicted RBP20.4■□□□□ 0.86
HSPG2-209ENST00000480900 CDK8P49336 464 aa20.39■□□□□ 0.85
HSPG2-209ENST00000480900 SBK1Q52WX2 424 aa20.39■□□□□ 0.85
HSPG2-209ENST00000480900 ACER1Q8TDN7 264 aa20.39■□□□□ 0.85
HSPG2-209ENST00000480900 M0R2C6 588 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
HSPG2-209ENST00000480900 HERVK_113P62684 666 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 ZYXQ15942 572 aaKnown RBP20.38■□□□□ 0.85
HSPG2-209ENST00000480900 ZMYM1Q5SVZ6 1142 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 RAET1EQ8TD07 263 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 GTF3C2Q8WUA4 911 aaPredicted RBP20.38■□□□□ 0.85
HSPG2-209ENST00000480900 P2RX7Q99572 595 aaKnown RBP20.38■□□□□ 0.85
HSPG2-209ENST00000480900 LNPKQ9C0E8 428 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 MORF4L1Q9UBU8 362 aa20.38■□□□□ 0.85
HSPG2-209ENST00000480900 ROBO3Q96MS0 1386 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 SMIM22K7EJ46 135 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 IGHDP01880 384 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 PRKCZQ05513 592 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 EVI5LQ96CN4 794 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 PLXNB2O15031 1838 aa20.37■□□□□ 0.85
HSPG2-209ENST00000480900 RLFQ13129 1914 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 MYH4Q9Y623 1939 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L15C9J2P7 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L13C9JLJ4 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L11C9JVI0 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L18D6R9N7 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L22D6RA61 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L17D6RBQ6 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L19D6RCP7 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L20D6RJB6 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 AKR1B1P15121 316 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 VCAM1P19320 739 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 USP17L24Q0WX57 530 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 SH3TC2Q8TF17 1288 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 COA7Q96BR5 231 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 EPB41L4AQ9HCS5 686 aaPredicted RBP20.36■□□□□ 0.85
HSPG2-209ENST00000480900 PARP14Q460N5 1801 aa20.36■□□□□ 0.85
HSPG2-209ENST00000480900 A0A1W2PRG0 241 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 PATL2C9JE40 543 aaKnown RBP20.35■□□□□ 0.85
HSPG2-209ENST00000480900 GRK4P32298 578 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 TDO2P48775 406 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 NUCB1Q02818 461 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 CHD1LQ86WJ1 897 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 TICAM2Q86XR7 235 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
HSPG2-209ENST00000480900 TMEM106CQ9BVX2 250 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 GABRQQ9UN88 632 aa20.35■□□□□ 0.85
HSPG2-209ENST00000480900 BRCA2P51587 3418 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 POTEFA5A3E0 1075 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 APPP05067 770 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 FLT3LGP49771 235 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 ICA1Q05084 483 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 IRF5Q13568 498 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 B4GALNT3Q6L9W6 998 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 CATSPERGQ6ZRH7 1159 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 SLAIN1Q8ND83 568 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 NACAP1Q9BZK3 213 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 SH2D4AQ9H788 454 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
HSPG2-209ENST00000480900 IFNL3Q8IZI9 196 aa20.33■□□□□ 0.85
HSPG2-209ENST00000480900 GPRC5AQ8NFJ5 357 aa20.33■□□□□ 0.85
HSPG2-209ENST00000480900 TXNRD2Q9NNW7 524 aa20.33■□□□□ 0.85
HSPG2-209ENST00000480900 RBPJLQ9UBG7 517 aa20.33■□□□□ 0.85
HSPG2-209ENST00000480900 MINDY4BA8MYZ0 360 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 LBX2Q6XYB7 198 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 CLEC10AQ8IUN9 316 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 SIAH1Q8IUQ4 282 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 LPAR1Q92633 364 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 RPAP3Q9H6T3 665 aaPredicted RBP20.32■□□□□ 0.84
HSPG2-209ENST00000480900 KANSL2Q9H9L4 492 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 TMX2Q9Y320 296 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 RABGAP1Q9Y3P9 1069 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 A0A0G2JMZ2 1700 aa20.32■□□□□ 0.84
HSPG2-209ENST00000480900 ADCY3O60266 1144 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 RASA1P20936 1047 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 ERVK-24P63145 666 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 PLEKHM2Q8IWE5 1019 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 PXYLP1Q8TE99 480 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 OSBPL3Q9H4L5 887 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 ZNF287Q9HBT7 754 aa20.31■□□□□ 0.84
HSPG2-209ENST00000480900 MAPK4P31152 587 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 PAGR1Q9BTK6 254 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms