RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 SIAH1Q8IUQ4 282 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 ZNF444Q8N0Y2 327 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 FBXL16Q8N461 479 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 ZKSCAN4Q969J2 545 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 TMEM87BQ96K49 555 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 WRNIP1Q96S55 665 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 TBC1D2Q9BYX2 928 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 ZNF287Q9HBT7 754 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 TAOK2Q9UL54 1235 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 TPCN1Q9ULQ1 816 aa10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 ANGEL1Q9UNK9 670 aaKnown RBP10.55□□□□□ -0.72
NUDCD3-208ENST00000480209 RLFQ13129 1914 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 DTNBO60941 627 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 YY1P25490 414 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 SUPT20HL1Q3ZLR7 823 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 DCAF15Q66K64 600 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 TMEM179Q6ZVK1 233 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 IQCA1Q86XH1 822 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 LRRC47Q8N1G4 583 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 ZNF784Q8NCA9 323 aaPredicted RBP10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 SNX21Q969T3 373 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 CCDC17Q96LX7 622 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 UBAC1Q9BSL1 405 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 MYL10Q9BUA6 226 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 ZNF408Q9H9D4 720 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 MTMR4Q9NYA4 1195 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 BAZ2BQ9UIF8 2168 aaKnown RBP10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
NUDCD3-208ENST00000480209 NID2Q14112 1375 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 KLF18A0A0U1RQI7 1052 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 ST18O60284 1047 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 RXRAP19793 462 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 NT5C2P49902 561 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 VGLL4Q14135 290 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 WTAPQ15007 396 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 RAB3GAP1Q15042 981 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 ME3Q16798 604 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 NOL9Q5SY16 702 aaKnown RBP10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 APOA5Q6Q788 366 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 SGMS1Q86VZ5 419 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 SCYL3Q8IZE3 742 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 ACER1Q8TDN7 264 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 CLMNQ96JQ2 1002 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 TMEM47Q9BQJ4 181 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 SNCAIPQ9Y6H5 919 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 COL11A1P12107 1806 aaPredicted RBP10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 PASKQ96RG2 1323 aa10.53□□□□□ -0.72
NUDCD3-208ENST00000480209 GOLGA8BA8MQT2 603 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 K7ELQ4 463 aaPredicted RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 CTNND1O60716 968 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 CELF2O95319 508 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 LIFRP42702 1097 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 ECE1P42892 770 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 EVCP57679 992 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 ICA1Q05084 483 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 STK3Q13188 491 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 DGKZQ13574 1117 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 MAP3K11Q16584 847 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 KIAA1755Q5JYT7 1200 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 IFIT1BQ5T764 474 aaKnown RBP10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 CST9Q5W186 159 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 MICU3Q86XE3 530 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 ZNF654Q8IZM8 581 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 NECAB1Q8N987 351 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 ANKS1AQ92625 1134 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 STX8Q9UNK0 236 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 A0A0G2JMZ2 1700 aa10.52□□□□□ -0.73
NUDCD3-208ENST00000480209 UBE2Q2LH0YL09 131 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 TTLL1O95922 423 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 ASNSP08243 561 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 TOP1P11387 765 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 PDIA3P30101 505 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 NF2P35240 595 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 ANP32AP39687 249 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 FGD1P98174 961 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 SCRN1Q12765 414 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 TROAPQ12815 778 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 SART3Q15020 963 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 ANKRD1Q15327 319 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 DGKHQ86XP1 1220 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 CCDC144CPQ8IYA2 1237 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 PNMA1Q8ND90 353 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 CHMP4CQ96CF2 233 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 ELP3Q9H9T3 547 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 NCOA5Q9HCD5 579 aaKnown RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 FAM217BQ9NTX9 383 aaPredicted RBP10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 NYAP2Q9P242 653 aa10.51□□□□□ -0.73
NUDCD3-208ENST00000480209 CLIP2Q9UDT6 1046 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms