RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 GTF3C2Q8WUA4 911 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-205ENST00000480127 EDC3Q96F86 508 aaKnown RBP8.62□□□□□ -1.03
COL17A1-205ENST00000480127 FEZ1Q99689 392 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 LBHD1Q9BQE6 289 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-205ENST00000480127 DBNDD2Q9BQY9 259 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 CHMP4BQ9H444 224 aaKnown RBP8.62□□□□□ -1.03
COL17A1-205ENST00000480127 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 DDX20Q9UHI6 824 aaKnown RBP8.62□□□□□ -1.03
COL17A1-205ENST00000480127 PALD1Q9ULE6 856 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 ZBTB21Q9ULJ3 1066 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 NDUFB9Q9Y6M9 179 aa8.62□□□□□ -1.03
COL17A1-205ENST00000480127 MAST2Q6P0Q8 1798 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 HOXC6P09630 235 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 IFIT2P09913 472 aaKnown RBP8.61□□□□□ -1.03
COL17A1-205ENST00000480127 CYP7A1P22680 504 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 PTPREP23469 700 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 ATN1P54259 1190 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-205ENST00000480127 ATP8B2P98198 1209 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 MAP3K12Q12852 859 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 ZNF697Q5TEC3 545 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 TRPV1Q8NER1 839 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 NPLOC4Q8TAT6 608 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 LPAR1Q92633 364 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 CDX2Q99626 313 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-205ENST00000480127 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-205ENST00000480127 SAP30BPQ9UHR5 308 aaKnown RBP8.61□□□□□ -1.03
COL17A1-205ENST00000480127 RABGAP1Q9Y3P9 1069 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 FRMPD3Q5JV73 1810 aa8.61□□□□□ -1.03
COL17A1-205ENST00000480127 SLC15A5A6NIM6 579 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 DNM1LO00429 736 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 GH2P01242 217 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 CYP2E1P05181 493 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-205ENST00000480127 CYP2C19P33261 490 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 RTP1P59025 263 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 SHHQ15465 462 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 C9orf50Q5SZB4 431 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 MFSD14CQ5VZR4 134 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 CATSPERGQ6ZRH7 1159 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 CLASRPQ8N2M8 674 aaKnown RBP8.6□□□□□ -1.03
COL17A1-205ENST00000480127 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 DDRGK1Q96HY6 314 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
COL17A1-205ENST00000480127 SEMA6BQ9H3T3 888 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 BTBD7Q9P203 1132 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
COL17A1-205ENST00000480127 LTBP2Q14767 1821 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 ZBED9Q6R2W3 1325 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L15C9J2P7 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L13C9JLJ4 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L11C9JVI0 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L18D6R9N7 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L22D6RA61 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L17D6RBQ6 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L19D6RCP7 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L20D6RJB6 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 MSCO60682 206 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 GLRX3O76003 335 aaKnown RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 CYBAP13498 195 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 CNGA1P29973 690 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 ZAP70P43403 619 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 CCNA1P78396 465 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 ATP2B2Q01814 1243 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 USP17L24Q0WX57 530 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 GRB14Q14449 540 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 ZYXQ15942 572 aaKnown RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 TATDN1Q6P1N9 297 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 LBX2Q6XYB7 198 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 CERS3Q8IU89 383 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 AMOTL1Q8IY63 956 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 PIAS4Q8N2W9 510 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 MAGEB6Q8N7X4 407 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 MIGA1Q8NAN2 632 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 MAFAQ8NHW3 353 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 SSH3Q8TE77 659 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 TTYH1Q9H313 450 aaPredicted RBP8.59□□□□□ -1.03
COL17A1-205ENST00000480127 GPR108Q9NPR9 543 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 UNC80Q8N2C7 3258 aa8.59□□□□□ -1.03
COL17A1-205ENST00000480127 CDK5RAP2Q96SN8 1893 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 SPDYE16A6NNV3 312 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 MPHOSPH10O00566 681 aaKnown RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 VCAM1P19320 739 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 POLA2Q14181 598 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 SNX17Q15036 470 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 RAB3GAP1Q15042 981 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 TTF1Q15361 905 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 GJC2Q5T442 439 aaPredicted RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 SLC39A5Q6ZMH5 540 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 ACER1Q8TDN7 264 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 MYLIPQ8WY64 445 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 BADQ92934 168 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 KIAA1683Q9H0B3 1180 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 IL1RAPL2Q9NP60 686 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 CABP5Q9NP86 173 aa8.58□□□□□ -1.04
COL17A1-205ENST00000480127 PIH1D3Q9NQM4 214 aaKnown RBP8.58□□□□□ -1.04
COL17A1-205ENST00000480127 PRDM6Q9NQX0 595 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms