RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 C20orf194Q5TEA3 1177 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 CCAR1Q8IX12 1150 aaKnown RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 LCORLQ8N3X6 602 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 ACER1Q8TDN7 264 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 DIS3LQ8TF46 1054 aaKnown RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 GTF3C2Q8WUA4 911 aaPredicted RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 SDR42E1Q8WUS8 393 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 SOCS4Q8WXH5 440 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 C12orf42Q96LP6 360 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 PORCNQ9H237 461 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 BOLA2Q9H3K6 86 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 ARMT1Q9H993 441 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 CWC22Q9HCG8 908 aaKnown RBP8.09□□□□□ -1.11
FN1-220ENST00000480024 CABP5Q9NP86 173 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 MCM9Q9NXL9 1143 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 RBPJLQ9UBG7 517 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 GJD2Q9UKL4 321 aa8.09□□□□□ -1.11
FN1-220ENST00000480024 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 MBD4O95243 580 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 PRKAR2AP13861 404 aaKnown RBP8.08□□□□□ -1.12
FN1-220ENST00000480024 ZKSCAN1P17029 563 aaPredicted RBP8.08□□□□□ -1.12
FN1-220ENST00000480024 MAPK4P31152 587 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP14P54578 494 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 SEPT2Q15019 361 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 Q3C1V9 767 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 WDR78Q5VTH9 848 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 POTEEQ6S8J3 1075 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 GPR142Q7Z601 462 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
FN1-220ENST00000480024 PAWRQ96IZ0 340 aaKnown RBP8.08□□□□□ -1.12
FN1-220ENST00000480024 NUDT12Q9BQG2 462 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 KIAA1683Q9H0B3 1180 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 CRISPLD2Q9H0B8 497 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 HMX1Q9NP08 348 aaPredicted RBP8.08□□□□□ -1.12
FN1-220ENST00000480024 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
FN1-220ENST00000480024 PAG1Q9NWQ8 432 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 PCDH10Q9P2E7 1040 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 A0A0G2JMZ2 1700 aa8.08□□□□□ -1.12
FN1-220ENST00000480024 RPTORQ8N122 1335 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 PRKAB2O43741 272 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 SMARCA5O60264 1052 aaPredicted RBP8.07□□□□□ -1.12
FN1-220ENST00000480024 EVI5O60447 810 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 CNMDO75829 334 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 CHGBP05060 677 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 ATP5JP18859 108 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 GUCY1A2P33402 732 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 ADD2P35612 726 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 GABPAQ06546 454 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 CCL14Q16627 93 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 CLEC10AQ8IUN9 316 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 DYNLL2Q96FJ2 89 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 APBA2Q99767 749 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.07□□□□□ -1.12
FN1-220ENST00000480024 CHMP4BQ9H444 224 aaKnown RBP8.07□□□□□ -1.12
FN1-220ENST00000480024 RPAP3Q9H6T3 665 aaPredicted RBP8.07□□□□□ -1.12
FN1-220ENST00000480024 RBM27Q9P2N5 1060 aaKnown RBP8.07□□□□□ -1.12
FN1-220ENST00000480024 NR2E3Q9Y5X4 410 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 PARP14Q460N5 1801 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 RLFQ13129 1914 aa8.07□□□□□ -1.12
FN1-220ENST00000480024 CYP2D7A0A087X1C5 515 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 A0A1W2PRG0 241 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 SPDYE16A6NNV3 312 aaPredicted RBP8.06□□□□□ -1.12
FN1-220ENST00000480024 XRCC5P13010 732 aaKnown RBP8.06□□□□□ -1.12
FN1-220ENST00000480024 RGS2P41220 211 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 CCNA1P78396 465 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 MAP3K21Q5TCX8 1036 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 CATSPERGQ6ZRH7 1159 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 NECAB2Q7Z6G3 386 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 C7orf61Q8IZ16 206 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 HAUS7Q99871 368 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 LRRCC1Q9C099 1032 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 BTBD7Q9P203 1132 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 RABGAP1Q9Y3P9 1069 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 COL11A1P12107 1806 aaPredicted RBP8.06□□□□□ -1.12
FN1-220ENST00000480024 ZNF236Q9UL36 1845 aa8.06□□□□□ -1.12
FN1-220ENST00000480024 SMIM22K7EJ46 135 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 AKR1B1P15121 316 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 CCND3P30281 292 aaPredicted RBP8.05□□□□□ -1.12
FN1-220ENST00000480024 ICA1Q05084 483 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 CACNB2Q08289 660 aaPredicted RBP8.05□□□□□ -1.12
FN1-220ENST00000480024 MAP2K5Q13163 448 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 MORN1Q5T089 497 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 TSHZ3Q63HK5 1081 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 SAMD1Q6SPF0 538 aaPredicted RBP8.05□□□□□ -1.12
FN1-220ENST00000480024 TMEM179Q6ZVK1 233 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 AMOTL1Q8IY63 956 aa8.05□□□□□ -1.12
FN1-220ENST00000480024 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms