RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 PRMT2P55345 433 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 SEPT2Q15019 361 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 PLEKHM2Q8IWE5 1019 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 ACER1Q8TDN7 264 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 SMCR8Q8TEV9 937 aaPredicted RBP12.63□□□□□ -0.39
SP140-210ENST00000479539 TRIM47Q96LD4 638 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 C12orf42Q96LP6 360 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 CCDC17Q96LX7 622 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 SEC62Q99442 399 aaKnown RBP12.63□□□□□ -0.39
SP140-210ENST00000479539 KIAA1683Q9H0B3 1180 aa12.63□□□□□ -0.39
SP140-210ENST00000479539 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
SP140-210ENST00000479539 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
SP140-210ENST00000479539 GCLCP48506 637 aaPredicted RBP12.62□□□□□ -0.39
SP140-210ENST00000479539 TMEM179Q6ZVK1 233 aa12.62□□□□□ -0.39
SP140-210ENST00000479539 P2RX7Q99572 595 aaKnown RBP12.62□□□□□ -0.39
SP140-210ENST00000479539 EPB41L4AQ9HCS5 686 aaPredicted RBP12.62□□□□□ -0.39
SP140-210ENST00000479539 SIPA1L1O43166 1804 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 MPHOSPH10O00566 681 aaKnown RBP12.61□□□□□ -0.39
SP140-210ENST00000479539 FMNL1O95466 1100 aaPredicted RBP12.61□□□□□ -0.39
SP140-210ENST00000479539 AKR1B1P15121 316 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 HOXD10P28358 340 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 IRX6P78412 446 aaPredicted RBP12.61□□□□□ -0.39
SP140-210ENST00000479539 FAM110CQ1W6H9 321 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 IFNL3Q8IZI9 196 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 ARMC5Q96C12 935 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 PTCH2Q9Y6C5 1203 aa12.61□□□□□ -0.39
SP140-210ENST00000479539 A0A1W2PRG0 241 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 APPP05067 770 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 FCGRTP55899 365 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
SP140-210ENST00000479539 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 FEZ1Q99689 392 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 NACAP1Q9BZK3 213 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 HELLSQ9NRZ9 838 aa12.6□□□□□ -0.39
SP140-210ENST00000479539 MINDY4BA8MYZ0 360 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L15C9J2P7 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L13C9JLJ4 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L11C9JVI0 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L18D6R9N7 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L22D6RA61 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L17D6RBQ6 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L19D6RCP7 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L20D6RJB6 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 FOXP2O15409 715 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 VCAM1P19320 739 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 TDO2P48775 406 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 HERVK_113P62684 666 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 USP17L24Q0WX57 530 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 ZYXQ15942 572 aaKnown RBP12.59□□□□□ -0.39
SP140-210ENST00000479539 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 GTF3C2Q8WUA4 911 aaPredicted RBP12.59□□□□□ -0.39
SP140-210ENST00000479539 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
SP140-210ENST00000479539 RBPJLQ9UBG7 517 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 DOCK1Q14185 1865 aa12.59□□□□□ -0.39
SP140-210ENST00000479539 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
SP140-210ENST00000479539 RASA1P20936 1047 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 SOX10P56693 466 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 ICA1Q05084 483 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 PRKCZQ05513 592 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 POTEEQ6S8J3 1075 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 CCDC129Q6ZRS4 1044 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 NBPF11Q86T75 865 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 ZNF333Q96JL9 665 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 ZNF287Q9HBT7 754 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 TXNRD2Q9NNW7 524 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 FOCADQ5VW36 1801 aa12.58□□□□□ -0.4
SP140-210ENST00000479539 HTTP42858 3142 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 TRIM6-TRIM34B2RNG4 842 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 SDSP20132 328 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 PDE4AP27815 886 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 ALX1Q15699 326 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 Q3C1V9 767 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 SLC9C1Q4G0N8 1177 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 GPRC5AQ8NFJ5 357 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 RILPL2Q969X0 211 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 NAPBQ9H115 298 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 SH2D4AQ9H788 454 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 ARHGEF10LQ9HCE6 1279 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 MYPNQ86TC9 1320 aa12.57□□□□□ -0.4
SP140-210ENST00000479539 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
SP140-210ENST00000479539 PHIPQ8WWQ0 1821 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 TNPO2O14787 897 aaKnown RBP12.56□□□□□ -0.4
SP140-210ENST00000479539 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
SP140-210ENST00000479539 FLT3LGP49771 235 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 PPARAQ07869 468 aa12.56□□□□□ -0.4
SP140-210ENST00000479539 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
SP140-210ENST00000479539 IRF5Q13568 498 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms