RNA–Protein interactions for RNA: ENST00000479430.5

COPS7B-220, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-220ENST00000479430 AGBL3Q8NEM8 1001 aa5.12□□□□□ -1.59
COPS7B-220ENST00000479430 ARMC5Q96C12 935 aa5.12□□□□□ -1.59
COPS7B-220ENST00000479430 MYD88Q99836 296 aa5.12□□□□□ -1.59
COPS7B-220ENST00000479430 TSPAN10Q9H1Z9 355 aaPredicted RBP5.12□□□□□ -1.59
COPS7B-220ENST00000479430 TMPRSS4Q9NRS4 437 aa5.12□□□□□ -1.59
COPS7B-220ENST00000479430 ZMYND8Q9ULU4 1186 aaPredicted RBP5.12□□□□□ -1.59
COPS7B-220ENST00000479430 FCF1Q9Y324 198 aaKnown RBP5.12□□□□□ -1.59
COPS7B-220ENST00000479430 ARAP2Q8WZ64 1704 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 TREHO43280 583 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 TAF5LO75529 589 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 HSP90B1P14625 803 aaKnown RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 NF2P35240 595 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 CACNB3P54284 484 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 GDF10P55107 478 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 AAMPQ13685 434 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 DSC3Q14574 896 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 SF3B3Q15393 1217 aaKnown RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 TAF1CQ15572 869 aaPredicted RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 NFE2L2Q16236 605 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 INTS6LQ5JSJ4 861 aaKnown RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 TJAP1Q5JTD0 557 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 DIS3LQ8TF46 1054 aaKnown RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 BRI3BPQ8WY22 251 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 OPTNQ96CV9 577 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 FAM163AQ96GL9 167 aaPredicted RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 ERO1AQ96HE7 468 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 PRMT6Q96LA8 375 aaPredicted RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 CFAP53Q96M91 514 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 PLEKHF1Q96S99 279 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 ISCA1Q9BUE6 129 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 DEFB129Q9H1M3 183 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 OSBPL3Q9H4L5 887 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 CPA4Q9UI42 421 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 BRPF3Q9ULD4 1205 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 NUDCQ9Y266 331 aa5.11□□□□□ -1.59
COPS7B-220ENST00000479430 DDX60LQ5H9U9 1706 aaKnown RBP5.11□□□□□ -1.59
COPS7B-220ENST00000479430 SPTBN5Q9NRC6 3674 aaKnown RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 MANSC4A6NHS7 340 aaPredicted RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 TCP10L2B9ZVM9 353 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 BACH1O14867 736 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 ZBTB39O15060 712 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 SLURP2P0DP57 97 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 PTPRFP10586 1907 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 MAPK8P45983 427 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 EIF1AXP47813 144 aaKnown RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 RBM5P52756 815 aaKnown RBP eCLIP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 EPHA4P54764 986 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 RIPK4P57078 832 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 FKBP1BP68106 108 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 GRIK5Q16478 980 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 CCL15Q16663 113 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 COX20Q5RI15 118 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 INTS3Q68E01 1043 aaKnown RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 TTLL5Q6EMB2 1281 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 C16orf46Q6P387 395 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 THSD4Q6ZMP0 1018 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 DEFB123Q8N688 67 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 TMEM87AQ8NBN3 555 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 VTI1AQ96AJ9 217 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 DUSP9Q99956 384 aaKnown RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 PITPNM2Q9BZ72 1349 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 GREM2Q9H772 168 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 PARP2Q9UGN5 583 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 MYH13Q9UKX3 1938 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 CDV3Q9UKY7 258 aaKnown RBP5.1□□□□□ -1.59
COPS7B-220ENST00000479430 GABRQQ9UN88 632 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 PRUNE2Q8WUY3 3088 aa5.1□□□□□ -1.59
COPS7B-220ENST00000479430 XDHP47989 1333 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 SCAMP3O14828 347 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 NDUFB5O43674 189 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 HTATSF1O43719 755 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 PLIN1O60240 522 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 SMARCA5O60264 1052 aaPredicted RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 FZD6O60353 706 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 IGHA2P01877 340 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 INHAP05111 366 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 LDHBP07195 334 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 HMGB1P09429 215 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 CCL5P13501 91 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ELNP15502 786 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 CCT4P50991 539 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ERVK-9P63128 1117 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 EHHADHQ08426 723 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 RAD51AP2Q09MP3 1159 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 CFAP100Q494V2 611 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 FAM26DQ5JW98 314 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 VASH1Q7L8A9 365 aaPredicted RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ANKRD18AQ8IVF6 992 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 PLBD2Q8NHP8 589 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 PIK3R5Q8WYR1 880 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ZKSCAN4Q969J2 545 aaPredicted RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 KCTD12Q96CX2 325 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ZBED3Q96IU2 234 aaPredicted RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 CFHR5Q9BXR6 569 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 TMEM39BQ9GZU3 492 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 PRO3102Q9H379 93 aa5.09□□□□□ -1.59
COPS7B-220ENST00000479430 TDRD3Q9H7E2 651 aaKnown RBP5.09□□□□□ -1.59
COPS7B-220ENST00000479430 ETNK1Q9HBU6 452 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms