RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GPR25O00155 361 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 FGAP02671 866 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 CHMLP26374 656 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 USP14P54578 494 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 USP17L2Q6R6M4 530 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 PNMA3Q9UL41 463 aa24.36■■□□□ 1.49
VARS-224ENST00000479051 GUCY1A2P33402 732 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 GPAT2Q6NUI2 795 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 DSCC1Q9BVC3 393 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 SH2D4AQ9H788 454 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 ARHGEF10LQ9HCE6 1279 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 ANAPC4Q9UJX5 808 aa24.35■■□□□ 1.49
VARS-224ENST00000479051 FKTNO75072 461 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 RASA1P20936 1047 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 ICA1Q05084 483 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 SKAP1Q86WV1 359 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 KANSL2Q9H9L4 492 aa24.34■■□□□ 1.49
VARS-224ENST00000479051 TLR2O60603 784 aa24.33■■□□□ 1.49
VARS-224ENST00000479051 R3HDMLQ9H3Y0 253 aa24.33■■□□□ 1.49
VARS-224ENST00000479051 CTNNA3Q9UI47 895 aa24.33■■□□□ 1.49
VARS-224ENST00000479051 LOC285556D6RIA3 1793 aa24.32■■□□□ 1.48
VARS-224ENST00000479051 PRDM1O75626 825 aa24.32■■□□□ 1.48
VARS-224ENST00000479051 OSBPP22059 807 aa24.32■■□□□ 1.48
VARS-224ENST00000479051 CTDSPL2Q05D32 466 aa24.32■■□□□ 1.48
VARS-224ENST00000479051 ZNF296Q8WUU4 475 aaPredicted RBP24.32■■□□□ 1.48
VARS-224ENST00000479051 TSPY3P0CV98 308 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 TSPY8P0CW00 308 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 ZYXQ15942 572 aaKnown RBP24.31■■□□□ 1.48
VARS-224ENST00000479051 TREML2Q5T2D2 321 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 CASC1Q6TDU7 716 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 ACER1Q8TDN7 264 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 SMCR8Q8TEV9 937 aaPredicted RBP24.31■■□□□ 1.48
VARS-224ENST00000479051 C12orf42Q96LP6 360 aa24.31■■□□□ 1.48
VARS-224ENST00000479051 ZNF213O14771 459 aa24.3■■□□□ 1.48
VARS-224ENST00000479051 PCP11498 1178 aaKnown RBP24.3■■□□□ 1.48
VARS-224ENST00000479051 ATP2B2Q01814 1243 aa24.3■■□□□ 1.48
VARS-224ENST00000479051 CASP8AP2Q9UKL3 1982 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 SGSM2O43147 1006 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 HAND2P61296 217 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 IRX3P78415 501 aaPredicted RBP24.29■■□□□ 1.48
VARS-224ENST00000479051 SP3Q02447 781 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 IMMTQ16891 758 aaKnown RBP24.29■■□□□ 1.48
VARS-224ENST00000479051 PPP4R3BQ5MIZ7 849 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 COL13A1Q5TAT6 717 aaPredicted RBP24.29■■□□□ 1.48
VARS-224ENST00000479051 ERO1AQ96HE7 468 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 RNF41Q9H4P4 317 aaPredicted RBP24.29■■□□□ 1.48
VARS-224ENST00000479051 TOMM22Q9NS69 142 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 EMILIN3Q9NT22 766 aa24.29■■□□□ 1.48
VARS-224ENST00000479051 TSPY2A6NKD2 308 aa24.28■■□□□ 1.48
VARS-224ENST00000479051 ORC4O43929 436 aa24.28■■□□□ 1.48
VARS-224ENST00000479051 CYP2C8P10632 490 aa24.28■■□□□ 1.48
VARS-224ENST00000479051 EEF2P13639 858 aaKnown RBP24.28■■□□□ 1.48
VARS-224ENST00000479051 DGKZQ13574 1117 aa24.28■■□□□ 1.48
VARS-224ENST00000479051 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.28■■□□□ 1.48
VARS-224ENST00000479051 HOXA7P31268 230 aaPredicted RBP24.27■■□□□ 1.48
VARS-224ENST00000479051 TFAP4Q01664 338 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 KIF22Q14807 665 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 ARHGEF6Q15052 776 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 MFSD6Q6ZSS7 791 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 KIAA1211Q6ZU35 1233 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 NEDD1Q8NHV4 660 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 LPAR1Q92633 364 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 IL25Q9H293 177 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 TMX2Q9Y320 296 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 PLIN4Q96Q06 1357 aa24.27■■□□□ 1.48
VARS-224ENST00000479051 A0A1W2PRG0 241 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 RANBP6O60518 1105 aaKnown RBP24.26■■□□□ 1.47
VARS-224ENST00000479051 AKNAD1Q5T1N1 836 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 C17orf99Q6UX52 265 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 CLEC10AQ8IUN9 316 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.26■■□□□ 1.47
VARS-224ENST00000479051 ASCC2Q9H1I8 757 aaPredicted RBP24.26■■□□□ 1.47
VARS-224ENST00000479051 GOPCQ9HD26 462 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 NYAP2Q9P242 653 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 CPA4Q9UI42 421 aa24.26■■□□□ 1.47
VARS-224ENST00000479051 USP17L15C9J2P7 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L13C9JLJ4 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L11C9JVI0 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L18D6R9N7 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L22D6RA61 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L17D6RBQ6 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L19D6RCP7 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L20D6RJB6 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 CDC45O75419 566 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 FGRP09769 529 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 VCAM1P19320 739 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 GCLCP48506 637 aaPredicted RBP24.25■■□□□ 1.47
VARS-224ENST00000479051 NT5C2P49902 561 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 USP17L24Q0WX57 530 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 FAM47AQ5JRC9 791 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 RRP12Q5JTH9 1297 aaKnown RBP24.25■■□□□ 1.47
VARS-224ENST00000479051 CTU1Q7Z7A3 348 aaKnown RBP24.25■■□□□ 1.47
VARS-224ENST00000479051 STAG1Q8WVM7 1258 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 VCPKMTQ9H867 229 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 U3KPZ7 1027 aaPredicted RBP24.25■■□□□ 1.47
VARS-224ENST00000479051 ADGRA2Q96PE1 1338 aa24.25■■□□□ 1.47
VARS-224ENST00000479051 GREB1LQ9C091 1923 aaPredicted RBP24.24■■□□□ 1.47
VARS-224ENST00000479051 IGKV6D-41A0A0C4DH26 115 aa24.24■■□□□ 1.47
VARS-224ENST00000479051 SIAH1Q8IUQ4 282 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms