RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 SETDB2Q96T68 719 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 CRNKL1Q9BZJ0 848 aaKnown RBP17.13■□□□□ 0.33
ITSN2-211ENST00000478720 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
ITSN2-211ENST00000478720 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
ITSN2-211ENST00000478720 ATP2B1P20020 1258 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 EARS2Q5JPH6 523 aaKnown RBP17.13■□□□□ 0.33
ITSN2-211ENST00000478720 SMIM5Q71RC9 77 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 PPP1R13BQ96KQ4 1090 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 ATP8A2Q9NTI2 1148 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 SRP68Q9UHB9 627 aaKnown RBP17.13■□□□□ 0.33
ITSN2-211ENST00000478720 DACH1Q9UI36 760 aa17.13■□□□□ 0.33
ITSN2-211ENST00000478720 CNTNAP5Q8WYK1 1306 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 BMP15O95972 392 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 CFAP100Q494V2 611 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
ITSN2-211ENST00000478720 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 TFCP2L1Q9NZI6 479 aa17.12■□□□□ 0.33
ITSN2-211ENST00000478720 NPY5RQ15761 445 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
ITSN2-211ENST00000478720 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 BTAF1O14981 1849 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 IRS2Q9Y4H2 1338 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 hCG_1642624A0A1W2PR95 340 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 EVX2Q03828 476 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 VPS72Q15906 364 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 GRAMD1CQ8IYS0 662 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 FERMT2Q96AC1 680 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
ITSN2-211ENST00000478720 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
ITSN2-211ENST00000478720 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
ITSN2-211ENST00000478720 ZNF18P17022 549 aa17.1■□□□□ 0.33
ITSN2-211ENST00000478720 PRDX5P30044 214 aa17.1■□□□□ 0.33
ITSN2-211ENST00000478720 FMR1Q06787 632 aaKnown RBP eCLIP17.1■□□□□ 0.33
ITSN2-211ENST00000478720 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
ITSN2-211ENST00000478720 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
ITSN2-211ENST00000478720 ZPR1O75312 459 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 TUBB4AP04350 444 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
ITSN2-211ENST00000478720 PRKCSHP14314 528 aaPredicted RBP17.09■□□□□ 0.33
ITSN2-211ENST00000478720 TM4SF1P30408 202 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 TPTE2Q6XPS3 522 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 PDILTQ8N807 584 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 CTCFLQ8NI51 663 aaPredicted RBP17.09■□□□□ 0.33
ITSN2-211ENST00000478720 CYP2D6P10635 497 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 CCDC34Q96HJ3 373 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 NHSQ6T4R5 1651 aa17.09■□□□□ 0.33
ITSN2-211ENST00000478720 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
ITSN2-211ENST00000478720 A0A087X0B3 334 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 WNT7AO00755 349 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 GNPATO15228 680 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 CCP110O43303 1012 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 NMT2O60551 498 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 PLCD1P51178 756 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 TBX2Q13207 712 aaPredicted RBP17.08■□□□□ 0.33
ITSN2-211ENST00000478720 ZNF827Q17R98 1081 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 CT47A1Q5JQC4 288 aaPredicted RBP17.08■□□□□ 0.33
ITSN2-211ENST00000478720 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 PPP4R3BQ5MIZ7 849 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 ARID3AQ99856 593 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 NFE2L3Q9Y4A8 694 aa17.08■□□□□ 0.33
ITSN2-211ENST00000478720 SBF2Q86WG5 1849 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 SLFN14P0C7P3 912 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 ERCC5P28715 1186 aaPredicted RBP17.08■□□□□ 0.32
ITSN2-211ENST00000478720 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
ITSN2-211ENST00000478720 SYMPKQ92797 1274 aaKnown RBP17.08■□□□□ 0.32
ITSN2-211ENST00000478720 DHX58Q96C10 678 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 EPSTI1Q96J88 318 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 MED15Q96RN5 788 aa17.08■□□□□ 0.32
ITSN2-211ENST00000478720 IGSF3O75054 1194 aa17.07■□□□□ 0.32
ITSN2-211ENST00000478720 SCG2P13521 617 aa17.07■□□□□ 0.32
ITSN2-211ENST00000478720 NT5C2P49902 561 aa17.07■□□□□ 0.32
ITSN2-211ENST00000478720 ATP2C1P98194 919 aaPredicted RBP17.07■□□□□ 0.32
ITSN2-211ENST00000478720 NOM1Q5C9Z4 860 aaKnown RBP17.07■□□□□ 0.32
ITSN2-211ENST00000478720 TXNRD3Q86VQ6 643 aa17.07■□□□□ 0.32
ITSN2-211ENST00000478720 TRAPPC10P48553 1259 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 ZNF174Q15697 407 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 RCSD1Q6JBY9 416 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 FCHSD1Q86WN1 690 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 CCDC24Q8N4L8 307 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 PAGE5Q96GU1 130 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 ZNF215Q9UL58 517 aaPredicted RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 NAA30Q147X3 362 aaPredicted RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 ERO1AQ96HE7 468 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 L2HGDHQ9H9P8 463 aa17.06■□□□□ 0.32
ITSN2-211ENST00000478720 RTCBQ9Y3I0 505 aaKnown RBP17.06■□□□□ 0.32
ITSN2-211ENST00000478720 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
ITSN2-211ENST00000478720 TSPY2A6NKD2 308 aa17.05■□□□□ 0.32
ITSN2-211ENST00000478720 TMEM139Q8IV31 216 aa17.05■□□□□ 0.32
ITSN2-211ENST00000478720 CGNQ9P2M7 1197 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms