RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 APPBP2Q92624 585 aa16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 TMOD4Q9NZQ9 345 aa16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 SWAP70Q9UH65 585 aa16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 MKI67P46013 3256 aaKnown RBP16.59■□□□□ 0.25
SOX2-OT-208ENST00000477928 MPHOSPH10O00566 681 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 ELNP15502 786 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 KIAA1755Q5JYT7 1200 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 CTR9Q6PD62 1173 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 STRBPQ96SI9 672 aaKnown RBP16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 FEZ1Q99689 392 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 EPB41L4AQ9HCS5 686 aaPredicted RBP16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
SOX2-OT-208ENST00000477928 GSG1L2A8MUP6 293 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 C19orf81C9J6K1 198 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 TNPO2O14787 897 aaKnown RBP16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 VCAM1P19320 739 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 FLT3LGP49771 235 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 HERVK_113P62684 666 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 IRX3P78415 501 aaPredicted RBP16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 C12orf60Q5U649 245 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 RAET1EQ8TD07 263 aa16.57■□□□□ 0.24
SOX2-OT-208ENST00000477928 GNRH1P01148 92 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 IGHDP01880 384 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 HOXA7P31268 230 aaPredicted RBP16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 GRK4P32298 578 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 CDK8P49336 464 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 PDE1AP54750 535 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 NUCB1Q02818 461 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 SIAH1Q8IUQ4 282 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 OSBPL3Q9H4L5 887 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 RBPJLQ9UBG7 517 aa16.56■□□□□ 0.24
SOX2-OT-208ENST00000477928 CNMDO75829 334 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 Q3C1V9 767 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 SHISA4Q96DD7 197 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 C12orf42Q96LP6 360 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 PAGR1Q9BTK6 254 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 CABP5Q9NP86 173 aa16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 ARPP21Q9UBL0 812 aaPredicted RBP16.55■□□□□ 0.24
SOX2-OT-208ENST00000477928 GPAA1O43292 621 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 GCLCP48506 637 aaPredicted RBP16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 PRMT2P55345 433 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 SBK1Q52WX2 424 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 C16orf86Q6ZW13 317 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 LNPKQ9C0E8 428 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 PORCNQ9H237 461 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 MORF4L1Q9UBU8 362 aa16.54■□□□□ 0.24
SOX2-OT-208ENST00000477928 FOXP2O15409 715 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 ADCY3O60266 1144 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 HOXD10P28358 340 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 TRIM32Q13049 653 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 SPICE1Q8N0Z3 855 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 UNC93B1Q9H1C4 597 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 RPAP3Q9H6T3 665 aaPredicted RBP16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 BIN2Q9UBW5 565 aaPredicted RBP16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 MYH8P13535 1937 aa16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
SOX2-OT-208ENST00000477928 CCL5P13501 91 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 USP14P54578 494 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 TMEM106CQ9BVX2 250 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 NACAP1Q9BZK3 213 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 BTBD7Q9P203 1132 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 GJD2Q9UKL4 321 aa16.52■□□□□ 0.24
SOX2-OT-208ENST00000477928 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 MINDY4BA8MYZ0 360 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L15C9J2P7 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L13C9JLJ4 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L11C9JVI0 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L18D6R9N7 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L22D6RA61 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L17D6RBQ6 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L19D6RCP7 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L20D6RJB6 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 PRDM1O75626 825 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 INHAP05111 366 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 ICA1Q05084 483 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 USP17L24Q0WX57 530 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 CATSPERGQ6ZRH7 1159 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 TMEM179Q6ZVK1 233 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 GTF3C2Q8WUA4 911 aaPredicted RBP16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 ZNF287Q9HBT7 754 aa16.51■□□□□ 0.23
SOX2-OT-208ENST00000477928 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
SOX2-OT-208ENST00000477928 RASA1P20936 1047 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms