RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 EMILIN3Q9NT22 766 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 GNL3LQ9NVN8 582 aaKnown RBP9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 HERC5Q9UII4 1024 aaKnown RBP9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 DENND2AQ9ULE3 1009 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 PHF24Q9UPV7 400 aa9.16□□□□□ -0.94
SPTLC1-205ENST00000477888 EYA2O00167 538 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 ERC2O15083 957 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 ASNSP08243 561 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 MRE11P49959 708 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 FAAP100Q0VG06 881 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 TMEM240Q5SV17 173 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 OLFML2BQ68BL8 750 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 CCDC129Q6ZRS4 1044 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 ATG9AQ7Z3C6 839 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 ANKRD33Q7Z3H0 272 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 WWC1Q8IX03 1113 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 SLF2Q8IX21 1173 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 ZNF384Q8TF68 577 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 TOX2Q96NM4 488 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 CWC22Q9HCG8 908 aaKnown RBP9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 TMEM39AQ9NV64 488 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 CHD7Q9P2D1 2997 aa9.15□□□□□ -0.94
SPTLC1-205ENST00000477888 LOC285556D6RIA3 1793 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 TLL1O43897 1013 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 PQBP1O60828 265 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 MAP4K4O95819 1239 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 TIMP1P01033 207 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 PHKA1P46020 1223 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 RFX5P48382 616 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 CCDC27Q2M243 656 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 SHROOM1Q2M3G4 852 aaPredicted RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 PRAMEF19Q5SWL8 479 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 WDR78Q5VTH9 848 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 SLC4A10Q6U841 1118 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 LBX2Q6XYB7 198 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 DZIP1Q86YF9 867 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 ZGPATQ8N5A5 531 aaKnown RBP9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 SLC44A5Q8NCS7 719 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 HERVK_113Q902F9 699 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 BTBD7Q9P203 1132 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 PI4KBQ9UBF8 816 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 IVNS1ABPQ9Y6Y0 642 aa9.14□□□□□ -0.95
SPTLC1-205ENST00000477888 DOCK1Q14185 1865 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 REV3LO60673 3130 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 FAM86C2PA6NEL3 165 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 PI4K2BG5E9Z4 385 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 SMIM22K7EJ46 135 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 MECOMQ03112 1051 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 FAM47AQ5JRC9 791 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 MFSD5Q6N075 450 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L2Q6R6M4 530 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 CATSPERGQ6ZRH7 1159 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 DPP9Q86TI2 863 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 DNAJC18Q9H819 358 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 GINM1Q9NU53 330 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 ABCF2Q9UG63 623 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 TBX21Q9UL17 535 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 RLFQ13129 1914 aa9.13□□□□□ -0.95
SPTLC1-205ENST00000477888 IL16Q14005 1332 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 AK9Q5TCS8 1911 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 A0A1W2PQ45 241 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 A0A1W2PQY0 241 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L15C9J2P7 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L13C9JLJ4 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L11C9JVI0 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L18D6R9N7 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L22D6RA61 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L17D6RBQ6 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L19D6RCP7 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L20D6RJB6 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 STRNO43815 780 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 COBLO75128 1261 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 POU3F3P20264 500 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 ADORA2AP29274 412 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 RASGRF1Q13972 1273 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 RAB30Q15771 203 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 ATP2B3Q16720 1220 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 SPTY2D1Q68D10 685 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 ZNF365Q70YC5 407 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 C12orf42Q96LP6 360 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 NKX2-4Q9H2Z4 354 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 SLC28A3Q9HAS3 691 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 MSRAQ9UJ68 235 aa9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 YBX2Q9Y2T7 364 aaKnown RBP9.12□□□□□ -0.95
SPTLC1-205ENST00000477888 PDS5AQ29RF7 1337 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 FANCIQ9NVI1 1328 aa9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 DCDC2CA8MYV0 355 aa9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 ACRP10323 421 aa9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 EXOSC9Q06265 439 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 PPIGQ13427 754 aaKnown RBP eCLIP9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 CCDC174Q6PII3 467 aa9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 FOXP4Q8IVH2 680 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 DHX36Q9H2U1 1008 aaKnown RBP9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 CD320Q9NPF0 282 aa9.11□□□□□ -0.95
SPTLC1-205ENST00000477888 XPNPEP3Q9NQH7 507 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms