RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 NLGN2Q8NFZ4 835 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 RASSF4Q9H2L5 321 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 SLC12A5Q9H2X9 1139 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 SEC31BQ9NQW1 1179 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 NLRP2Q9NX02 1062 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 UBR3Q6ZT12 1888 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 ROCK2O75116 1388 aaKnown RBP6.55□□□□□ -1.36
CKS1B-207ENST00000477676 C5P01031 1676 aa6.55□□□□□ -1.36
CKS1B-207ENST00000477676 IL2RBP14784 551 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 TRIP4Q15650 581 aaPredicted RBP6.54□□□□□ -1.36
CKS1B-207ENST00000477676 VSIG10LQ86VR7 867 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 OSBPL1AQ9BXW6 950 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 RNF208Q9H0X6 261 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 NOVA2Q9UNW9 492 aaKnown RBP6.54□□□□□ -1.36
CKS1B-207ENST00000477676 MAP2P11137 1827 aaKnown RBP6.54□□□□□ -1.36
CKS1B-207ENST00000477676 MEGF6O75095 1541 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 A0A1W2PP64 1363 aa6.54□□□□□ -1.36
CKS1B-207ENST00000477676 EDC4Q6P2E9 1401 aaKnown RBP6.53□□□□□ -1.36
CKS1B-207ENST00000477676 ZNF648Q5T619 568 aaPredicted RBP6.53□□□□□ -1.36
CKS1B-207ENST00000477676 C16orf46Q6P387 395 aa6.53□□□□□ -1.36
CKS1B-207ENST00000477676 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
CKS1B-207ENST00000477676 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
CKS1B-207ENST00000477676 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
CKS1B-207ENST00000477676 ZNF124Q15973 351 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 SGO2Q562F6 1265 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 COX20Q5RI15 118 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 TTC39BQ5VTQ0 682 aaPredicted RBP6.52□□□□□ -1.37
CKS1B-207ENST00000477676 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 DDX54Q8TDD1 881 aaKnown RBP6.52□□□□□ -1.37
CKS1B-207ENST00000477676 IP6K1Q92551 441 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 RUSC1Q9BVN2 902 aa6.52□□□□□ -1.37
CKS1B-207ENST00000477676 KIAA1551Q9HCM1 1747 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 KIF20BQ96Q89 1820 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 ELOAQ14241 798 aaKnown RBP6.51□□□□□ -1.37
CKS1B-207ENST00000477676 GPR162Q16538 588 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 SPOCD1Q6ZMY3 1216 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 AMIGO3Q86WK7 504 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 COL23A1Q86Y22 540 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-207ENST00000477676 TTC16Q8NEE8 873 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 LTV1Q96GA3 475 aaPredicted RBP6.51□□□□□ -1.37
CKS1B-207ENST00000477676 POP1Q99575 1024 aaKnown RBP6.51□□□□□ -1.37
CKS1B-207ENST00000477676 PBX4Q9BYU1 374 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 ADAM19Q9H013 955 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 ANKRD36BQ8N2N9 1353 aa6.51□□□□□ -1.37
CKS1B-207ENST00000477676 MAP3K19Q56UN5 1328 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 PKD1L3Q7Z443 1732 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 DBX1A6NMT0 343 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 RPLP1P05386 114 aaKnown RBP6.5□□□□□ -1.37
CKS1B-207ENST00000477676 PTPRAP18433 802 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 HOXC9P31274 260 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 SCNN1AP37088 669 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 NLRP12P59046 1061 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 CPSF6Q16630 551 aaKnown RBP eCLIP6.5□□□□□ -1.37
CKS1B-207ENST00000477676 ETFBKMTQ8IXQ9 262 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 TMC1Q8TDI8 760 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 TESK2Q96S53 571 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 ZMYND15Q9H091 742 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 BSDC1Q9NW68 430 aaPredicted RBP6.5□□□□□ -1.37
CKS1B-207ENST00000477676 KIF13BQ9NQT8 1826 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 C4BP0C0L5 1744 aa6.5□□□□□ -1.37
CKS1B-207ENST00000477676 MYH14Q7Z406 1995 aaKnown RBP6.49□□□□□ -1.37
CKS1B-207ENST00000477676 BRCA1P38398 1863 aaKnown RBP6.49□□□□□ -1.37
CKS1B-207ENST00000477676 N4BP2Q86UW6 1770 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-207ENST00000477676 MEGF11A6BM72 1044 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 CYP26A1O43174 497 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 PRMT3O60678 531 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 KIF4AO95239 1232 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 PCSK2P16519 638 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 FKBP5Q13451 457 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-207ENST00000477676 CDCA8Q53HL2 280 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 SMIM5Q71RC9 77 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 USHBP1Q8N6Y0 703 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 CEP120Q8N960 986 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 WNT8BQ93098 351 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 PRIMPOLQ96LW4 560 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 OSGEPQ9NPF4 335 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 PAK6Q9NQU5 681 aaPredicted RBP6.49□□□□□ -1.37
CKS1B-207ENST00000477676 TFCP2L1Q9NZI6 479 aa6.49□□□□□ -1.37
CKS1B-207ENST00000477676 ANKRD26Q9UPS8 1709 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 H3BRJ5 948 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 PAPLNO95428 1278 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 RRS1Q15050 365 aaKnown RBP6.48□□□□□ -1.37
CKS1B-207ENST00000477676 NFKBIBQ15653 356 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 AGBL5Q8NDL9 886 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 FLCNQ8NFG4 579 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 ZCRB1Q8TBF4 217 aaKnown RBP6.48□□□□□ -1.37
CKS1B-207ENST00000477676 SYTL4Q96C24 671 aaPredicted RBP6.48□□□□□ -1.37
CKS1B-207ENST00000477676 CARD11Q9BXL7 1154 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 GTF3C3Q9Y5Q9 886 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 ATP10DQ9P241 1426 aa6.48□□□□□ -1.37
CKS1B-207ENST00000477676 ADCY9O60503 1353 aa6.47□□□□□ -1.37
CKS1B-207ENST00000477676 FAM95CA0A1B0GW59 222 aa6.47□□□□□ -1.37
CKS1B-207ENST00000477676 POLD1P28340 1107 aa6.47□□□□□ -1.37
CKS1B-207ENST00000477676 CABP4P57796 275 aa6.47□□□□□ -1.37
CKS1B-207ENST00000477676 HDGFL2Q7Z4V5 671 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-207ENST00000477676 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms