RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 A0A0D9SFI3 127 aa21.17■□□□□ 0.98
PTPN7-209ENST00000477554 C16orf86Q6ZW13 317 aa21.17■□□□□ 0.98
PTPN7-209ENST00000477554 SLC45A1Q9Y2W3 748 aa21.17■□□□□ 0.98
PTPN7-209ENST00000477554 MKI67P46013 3256 aaKnown RBP21.16■□□□□ 0.98
PTPN7-209ENST00000477554 MINDY4BA8MYZ0 360 aa21.16■□□□□ 0.98
PTPN7-209ENST00000477554 PSMC4P43686 418 aa21.16■□□□□ 0.98
PTPN7-209ENST00000477554 EVI5LQ96CN4 794 aa21.16■□□□□ 0.98
PTPN7-209ENST00000477554 P2RX7Q99572 595 aaKnown RBP21.16■□□□□ 0.98
PTPN7-209ENST00000477554 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.16■□□□□ 0.98
PTPN7-209ENST00000477554 TACC3Q9Y6A5 838 aa21.16■□□□□ 0.98
PTPN7-209ENST00000477554 PKN2Q16513 984 aaKnown RBP21.15■□□□□ 0.98
PTPN7-209ENST00000477554 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
PTPN7-209ENST00000477554 IFNL3Q8IZI9 196 aa21.15■□□□□ 0.98
PTPN7-209ENST00000477554 TBC1D2Q9BYX2 928 aa21.15■□□□□ 0.98
PTPN7-209ENST00000477554 TXNRD2Q9NNW7 524 aa21.15■□□□□ 0.98
PTPN7-209ENST00000477554 DOCK3Q8IZD9 2030 aa21.15■□□□□ 0.98
PTPN7-209ENST00000477554 TNRC18O15417 2968 aaPredicted RBP21.15■□□□□ 0.98
PTPN7-209ENST00000477554 GREB1LQ9C091 1923 aaPredicted RBP21.14■□□□□ 0.98
PTPN7-209ENST00000477554 APPP05067 770 aa21.14■□□□□ 0.98
PTPN7-209ENST00000477554 ZNF589Q86UQ0 364 aaPredicted RBP21.14■□□□□ 0.98
PTPN7-209ENST00000477554 SMCR8Q8TEV9 937 aaPredicted RBP21.14■□□□□ 0.98
PTPN7-209ENST00000477554 RILPL2Q969X0 211 aa21.14■□□□□ 0.98
PTPN7-209ENST00000477554 INCENPQ9NQS7 918 aa21.14■□□□□ 0.98
PTPN7-209ENST00000477554 GINM1Q9NU53 330 aa21.14■□□□□ 0.98
PTPN7-209ENST00000477554 GABRQQ9UN88 632 aa21.14■□□□□ 0.98
PTPN7-209ENST00000477554 TRIM6-TRIM34B2RNG4 842 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 PATL2C9JE40 543 aaKnown RBP21.13■□□□□ 0.97
PTPN7-209ENST00000477554 PRDM1O75626 825 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 OSBPP22059 807 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 NMIQ13287 307 aaPredicted RBP21.13■□□□□ 0.97
PTPN7-209ENST00000477554 SBK1Q52WX2 424 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 FEZ1Q99689 392 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 CABP5Q9NP86 173 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 TMOD4Q9NZQ9 345 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 ARPP21Q9UBL0 812 aaPredicted RBP21.13■□□□□ 0.97
PTPN7-209ENST00000477554 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
PTPN7-209ENST00000477554 C19orf81C9J6K1 198 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 TDO2P48775 406 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 USP17L2Q6R6M4 530 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 OSBPL3Q9H4L5 887 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 FMNL1O95466 1100 aaPredicted RBP21.12■□□□□ 0.97
PTPN7-209ENST00000477554 MYCP01106 439 aaPredicted RBP21.12■□□□□ 0.97
PTPN7-209ENST00000477554 VCAM1P19320 739 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 RASA1P20936 1047 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 HOXA7P31268 230 aaPredicted RBP21.12■□□□□ 0.97
PTPN7-209ENST00000477554 SH3TC2Q8TF17 1288 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 KIAA1683Q9H0B3 1180 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 ROBO3Q96MS0 1386 aa21.12■□□□□ 0.97
PTPN7-209ENST00000477554 GSPT1P15170 499 aaKnown RBP21.11■□□□□ 0.97
PTPN7-209ENST00000477554 PRKCZQ05513 592 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 Q3C1V9 767 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 GIMAP6Q6P9H5 292 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 TMEM179Q6ZVK1 233 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 C12orf42Q96LP6 360 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 IL25Q9H293 177 aa21.11■□□□□ 0.97
PTPN7-209ENST00000477554 RLFQ13129 1914 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 HERVK_113P62684 666 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 SPICE1Q8N0Z3 855 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 NKX2-3Q8TAU0 364 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 DDRGK1Q96HY6 314 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 RBPJLQ9UBG7 517 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 SRRDQ9UH36 339 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 PLXNB2O15031 1838 aa21.1■□□□□ 0.97
PTPN7-209ENST00000477554 CNMDO75829 334 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 EEF2P13639 858 aaKnown RBP21.09■□□□□ 0.97
PTPN7-209ENST00000477554 GNAT2P19087 354 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 IRX3P78415 501 aaPredicted RBP21.09■□□□□ 0.97
PTPN7-209ENST00000477554 ICA1Q05084 483 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 CTDSPL2Q05D32 466 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 KIF22Q14807 665 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 RPAP3Q9H6T3 665 aaPredicted RBP21.09■□□□□ 0.97
PTPN7-209ENST00000477554 PNMA3Q9UL41 463 aa21.09■□□□□ 0.97
PTPN7-209ENST00000477554 POTEFA5A3E0 1075 aa21.08■□□□□ 0.97
PTPN7-209ENST00000477554 SDSP20132 328 aa21.08■□□□□ 0.97
PTPN7-209ENST00000477554 FAM110CQ1W6H9 321 aa21.08■□□□□ 0.97
PTPN7-209ENST00000477554 AMOTL1Q8IY63 956 aa21.08■□□□□ 0.97
PTPN7-209ENST00000477554 MYPNQ86TC9 1320 aa21.08■□□□□ 0.96
PTPN7-209ENST00000477554 ATP2B2Q01814 1243 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 LRRFIP1Q32MZ4 808 aaKnown RBP21.07■□□□□ 0.96
PTPN7-209ENST00000477554 FAM47AQ5JRC9 791 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 CATSPERGQ6ZRH7 1159 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 PAGR1Q9BTK6 254 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 NAPBQ9H115 298 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 HELLSQ9NRZ9 838 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 PARP14Q460N5 1801 aa21.07■□□□□ 0.96
PTPN7-209ENST00000477554 FCGRTP55899 365 aa21.06■□□□□ 0.96
PTPN7-209ENST00000477554 PPARAQ07869 468 aa21.06■□□□□ 0.96
PTPN7-209ENST00000477554 PABPC4Q13310 644 aaKnown RBP eCLIP21.06■□□□□ 0.96
PTPN7-209ENST00000477554 MCMDC2Q4G0Z9 681 aa21.06■□□□□ 0.96
PTPN7-209ENST00000477554 ARMC5Q96C12 935 aa21.06■□□□□ 0.96
PTPN7-209ENST00000477554 PORCNQ9H237 461 aa21.06■□□□□ 0.96
PTPN7-209ENST00000477554 ZNF333Q96JL9 665 aa21.05■□□□□ 0.96
PTPN7-209ENST00000477554 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
PTPN7-209ENST00000477554 MKNK2Q9HBH9 465 aa21.05■□□□□ 0.96
PTPN7-209ENST00000477554 BTBD7Q9P203 1132 aa21.05■□□□□ 0.96
PTPN7-209ENST00000477554 MORF4L1Q9UBU8 362 aa21.05■□□□□ 0.96
PTPN7-209ENST00000477554 IGKV6D-41A0A0C4DH26 115 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L15C9J2P7 530 aa21.04■□□□□ 0.96
PTPN7-209ENST00000477554 USP17L13C9JLJ4 530 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms