RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CTU1Q7Z7A3 348 aaKnown RBP18.11■□□□□ 0.49
SEC13-215ENST00000477547 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
SEC13-215ENST00000477547 CCDC102AQ96A19 550 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 BACH2Q9BYV9 841 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 KRT23Q9C075 422 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 ELP3Q9H9T3 547 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 CABP5Q9NP86 173 aa18.11■□□□□ 0.49
SEC13-215ENST00000477547 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 TSPY3P0CV98 308 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 TSPY8P0CW00 308 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 JAG1P78504 1218 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 FAM47AQ5JRC9 791 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 RASEFQ8IZ41 740 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 ESR2Q92731 530 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 GINM1Q9NU53 330 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 SNX14Q9Y5W7 946 aa18.1■□□□□ 0.49
SEC13-215ENST00000477547 KDM4AO75164 1064 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 TFAP4Q01664 338 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 KRT32Q14532 448 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 RAB3GAP1Q15042 981 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
SEC13-215ENST00000477547 CLEC10AQ8IUN9 316 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 KCNB2Q92953 911 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 HPS5Q9UPZ3 1129 aa18.09■□□□□ 0.49
SEC13-215ENST00000477547 SPDYE5A6NIY4 337 aa18.08■□□□□ 0.49
SEC13-215ENST00000477547 SLC10A3P09131 477 aa18.08■□□□□ 0.49
SEC13-215ENST00000477547 NT5C2P49902 561 aa18.08■□□□□ 0.49
SEC13-215ENST00000477547 SEPT2Q15019 361 aa18.08■□□□□ 0.49
SEC13-215ENST00000477547 OTUD5Q96G74 571 aa18.08■□□□□ 0.49
SEC13-215ENST00000477547 PTPRAP18433 802 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 GUCY1A2P33402 732 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 ICA1Q05084 483 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 ADCK5Q3MIX3 580 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 TSGA10IPQ3SY00 556 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 ERO1BQ86YB8 467 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 RASAL3Q86YV0 1011 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 MB21D2Q8IYB1 491 aaPredicted RBP18.07■□□□□ 0.48
SEC13-215ENST00000477547 NEDD1Q8NHV4 660 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 NKX2-3Q8TAU0 364 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
SEC13-215ENST00000477547 JAKMIP1Q96N16 626 aaKnown RBP18.07■□□□□ 0.48
SEC13-215ENST00000477547 PARP14Q460N5 1801 aa18.06■□□□□ 0.48
SEC13-215ENST00000477547 USP17L5A8MUK1 530 aa18.06■□□□□ 0.48
SEC13-215ENST00000477547 SLC10A4Q96EP9 437 aa18.06■□□□□ 0.48
SEC13-215ENST00000477547 WNK4Q96J92 1243 aa18.06■□□□□ 0.48
SEC13-215ENST00000477547 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.06■□□□□ 0.48
SEC13-215ENST00000477547 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
SEC13-215ENST00000477547 IGKV6D-41A0A0C4DH26 115 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 NMT2O60551 498 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 ANAPC15P60006 121 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 CYB5R4Q7L1T6 521 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 IQCA1Q86XH1 822 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 CEP95Q96GE4 821 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 NEK1Q96PY6 1258 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 UBAC1Q9BSL1 405 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
SEC13-215ENST00000477547 ATP2B2Q01814 1243 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 PPATQ06203 517 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 PPIL2Q13356 520 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 FEZ1Q99689 392 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 ZKSCAN3Q9BRR0 538 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 TBC1D2Q9BYX2 928 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 KANSL2Q9H9L4 492 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 ZHX2Q9Y6X8 837 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 TNKSO95271 1327 aa18.04■□□□□ 0.48
SEC13-215ENST00000477547 TRIM75PA6NK02 468 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 PRC1O43663 620 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 CASTP20810 708 aaKnown RBP18.03■□□□□ 0.48
SEC13-215ENST00000477547 MCM5P33992 734 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 GJA5P36382 358 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 ANTXR2P58335 489 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 MKRN3Q13064 507 aaKnown RBP18.03■□□□□ 0.48
SEC13-215ENST00000477547 COL9A3Q14050 684 aaPredicted RBP18.03■□□□□ 0.48
SEC13-215ENST00000477547 PPP4R3BQ5MIZ7 849 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 BLOC1S2Q6QNY1 142 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 ZSWIM5Q9P217 1185 aa18.03■□□□□ 0.48
SEC13-215ENST00000477547 HMGB1P09429 215 aaKnown RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 ZBTB48P10074 688 aaPredicted RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 EEF2P13639 858 aaKnown RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 PSMA5P28066 241 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 RBM25P49756 843 aaKnown RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 MTMR2Q13614 643 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 SART3Q15020 963 aaKnown RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 SPRYD7Q5W111 196 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 CHST3Q7LGC8 479 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 ZNF280CQ8ND82 737 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 TBC1D32Q96NH3 1257 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 ZSCAN10Q96SZ4 725 aaPredicted RBP18.02■□□□□ 0.48
SEC13-215ENST00000477547 WDR18Q9BV38 432 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 SH2D4AQ9H788 454 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 IL17RBQ9NRM6 502 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 MTMR4Q9NYA4 1195 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
SEC13-215ENST00000477547 IRF6O14896 467 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 TTLL1O95922 423 aa18.01■□□□□ 0.47
SEC13-215ENST00000477547 CPA1P15085 419 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms