RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 PICK1Q9NRD5 415 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 IL17RBQ9NRM6 502 aa19.05■□□□□ 0.64
VHL-203ENST00000477538 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.05■□□□□ 0.64
VHL-203ENST00000477538 MYH6P13533 1939 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 ERICH2A1L162 156 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 IFIT3O14879 490 aaKnown RBP19.04■□□□□ 0.64
VHL-203ENST00000477538 NEK4P51957 841 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 CCDC178Q5BJE1 867 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 CLEC10AQ8IUN9 316 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 KANSL2Q9H9L4 492 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 PDRG1Q9NUG6 133 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
VHL-203ENST00000477538 UNCXA6NJT0 531 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 FGD1P98174 961 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 ICA1Q05084 483 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 TMEM67Q5HYA8 995 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 LDLRAD1Q5T700 205 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 ENAHQ8N8S7 591 aaPredicted RBP19.03■□□□□ 0.64
VHL-203ENST00000477538 MTMR4Q9NYA4 1195 aa19.03■□□□□ 0.64
VHL-203ENST00000477538 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
VHL-203ENST00000477538 LOC285556D6RIA3 1793 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 SH2B2O14492 632 aaPredicted RBP19.02■□□□□ 0.64
VHL-203ENST00000477538 PTPRAP18433 802 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 WTAPQ15007 396 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 SEC23AQ15436 765 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 PPP4R3BQ5MIZ7 849 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 Q6ZUG5 572 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 CCDC84Q86UT8 332 aaPredicted RBP19.02■□□□□ 0.64
VHL-203ENST00000477538 IGDCC4Q8TDY8 1250 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 CLMNQ96JQ2 1002 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 TTC14Q96N46 770 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 ELP3Q9H9T3 547 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 STX8Q9UNK0 236 aa19.02■□□□□ 0.64
VHL-203ENST00000477538 USP17L5A8MUK1 530 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 TTLL1O95922 423 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 RCSD1Q6JBY9 416 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 DGKHQ86XP1 1220 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 LY9Q9HBG7 655 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 ARHGEF10LQ9HCE6 1279 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 GPHNQ9NQX3 736 aaPredicted RBP19.01■□□□□ 0.63
VHL-203ENST00000477538 NYAP2Q9P242 653 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 PARP14Q460N5 1801 aa19.01■□□□□ 0.63
VHL-203ENST00000477538 EEF2P13639 858 aaKnown RBP19■□□□□ 0.63
VHL-203ENST00000477538 NOVP48745 357 aa19■□□□□ 0.63
VHL-203ENST00000477538 HUNKP57058 714 aa19■□□□□ 0.63
VHL-203ENST00000477538 ATP2B2Q01814 1243 aa19■□□□□ 0.63
VHL-203ENST00000477538 IFIT1BQ5T764 474 aaKnown RBP19■□□□□ 0.63
VHL-203ENST00000477538 FBXL16Q8N461 479 aa19■□□□□ 0.63
VHL-203ENST00000477538 IL27Q8NEV9 243 aa19■□□□□ 0.63
VHL-203ENST00000477538 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
VHL-203ENST00000477538 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
VHL-203ENST00000477538 CLIP2Q9UDT6 1046 aa19■□□□□ 0.63
VHL-203ENST00000477538 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 ST18O60284 1047 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 LIFRP42702 1097 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 AK2P54819 239 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 TOB2Q14106 344 aaPredicted RBP18.99■□□□□ 0.63
VHL-203ENST00000477538 ERO1BQ86YB8 467 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 TMTC2Q8N394 836 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 ANKS1AQ92625 1134 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 BRF1Q92994 677 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 SLC10A4Q96EP9 437 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 TBC1D2Q9BYX2 928 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 ALDH8A1Q9H2A2 487 aaPredicted RBP18.99■□□□□ 0.63
VHL-203ENST00000477538 SENP2Q9HC62 589 aa18.99■□□□□ 0.63
VHL-203ENST00000477538 BAZ2BQ9UIF8 2168 aaKnown RBP18.99■□□□□ 0.63
VHL-203ENST00000477538 SPDYE5A6NIY4 337 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
VHL-203ENST00000477538 ANKRD1Q15327 319 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 NFXL1Q6ZNB6 911 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 SAPCD2Q86UD0 394 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 SIAH1Q8IUQ4 282 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 ACER1Q8TDN7 264 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 CNKSR2Q8WXI2 1034 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 WDR18Q9BV38 432 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 KAT14Q9H8E8 782 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 TLL2Q9Y6L7 1015 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 ZHX2Q9Y6X8 837 aa18.98■□□□□ 0.63
VHL-203ENST00000477538 A0A1W2PRG0 241 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 ECE1P42892 770 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 PPATQ06203 517 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 APOBRQ0VD83 1088 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 SGMS1Q86VZ5 419 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 LRRC47Q8N1G4 583 aaKnown RBP18.97■□□□□ 0.63
VHL-203ENST00000477538 ZNF280CQ8ND82 737 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 MKL1Q969V6 931 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 OTUD5Q96G74 571 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 FEZ1Q99689 392 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 SH2D4AQ9H788 454 aa18.97■□□□□ 0.63
VHL-203ENST00000477538 ABT1Q9ULW3 272 aaKnown RBP18.97■□□□□ 0.63
VHL-203ENST00000477538 SPP2Q13103 211 aa18.96■□□□□ 0.63
VHL-203ENST00000477538 NOL8Q76FK4 1167 aaKnown RBP18.96■□□□□ 0.63
VHL-203ENST00000477538 PNMA1Q8ND90 353 aa18.96■□□□□ 0.63
VHL-203ENST00000477538 SYNPO2Q9UMS6 1093 aa18.96■□□□□ 0.63
VHL-203ENST00000477538 TMX2Q9Y320 296 aa18.96■□□□□ 0.63
VHL-203ENST00000477538 AFG3L2Q9Y4W6 797 aa18.96■□□□□ 0.63
VHL-203ENST00000477538 KLF18A0A0U1RQI7 1052 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms