RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 KRT9P35527 623 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 TSGA10IPQ3SY00 556 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 WWC2Q6AWC2 1192 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 LUC7LQ9NQ29 371 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 LUC7L2Q9Y383 392 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.45□□□□□ -0.424e-7■□□□□ 8.7
COL27A1-204ENST00000477421 ZNF804BA4D1E1 1349 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 ERVV-1B6SEH8 477 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 CTDNEP1O95476 244 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 IFNAR1P17181 557 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 SCNN1DP51172 638 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 EVCP57679 992 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 UBE4AQ14139 1066 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 KRT79Q5XKE5 535 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 KRT222Q8N1A0 295 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 SMARCC2Q8TAQ2 1214 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 FEZ1Q99689 392 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 GUCY1A2P33402 732 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 TBC1D8BQ0IIM8 1120 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 ST3GAL1Q11201 340 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 BMS1Q14692 1282 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
COL27A1-204ENST00000477421 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
COL27A1-204ENST00000477421 UTYO14607 1347 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 EIF3JO75822 258 aaKnown RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 RBM6P78332 1123 aaKnown RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 CRACR2AQ9BSW2 395 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 ARFGAP3Q9NP61 516 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 TBC1D7Q9P0N9 293 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 FOXN1O15353 648 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 SPECC1LQ69YQ0 1117 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 FRMPD2Q68DX3 1309 aaPredicted RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 KIF20BQ96Q89 1820 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 USO1O60763 962 aaKnown RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 MMP1P03956 469 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 SCG2P13521 617 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 LRRC47Q8N1G4 583 aaKnown RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 CSGALNACT2Q8N6G5 542 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 EYA3Q99504 573 aa12.44□□□□□ -0.42
COL27A1-204ENST00000477421 SAMSN1Q9NSI8 373 aaKnown RBP12.44□□□□□ -0.42
COL27A1-204ENST00000477421 MACROD2A1Z1Q3 448 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 CCDC66A2RUB6 948 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 GSG1L2A8MUP6 293 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 KLRF2D3W0D1 207 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 MEGF6O75095 1541 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 FDPSP14324 419 aaKnown RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 NOP2P46087 812 aaKnown RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 SYCP1Q15431 976 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 DOK7Q18PE1 504 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 SLF1Q9BQI6 1058 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 MECOMQ03112 1051 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 PAK1Q13153 545 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 TRIM28Q13263 835 aaKnown RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 FCHSD1Q86WN1 690 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 FMR1NBQ8N0W7 255 aaPredicted RBP12.43□□□□□ -0.42
COL27A1-204ENST00000477421 PSMB7Q99436 277 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 IMPACTQ9P2X3 320 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 RICTORQ6R327 1708 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 PLCG2P16885 1265 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 USP8P40818 1118 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 CCDC42Q96M95 316 aa12.43□□□□□ -0.42
COL27A1-204ENST00000477421 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CTAGE9A4FU28 777 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 WDHD1O75717 1129 aaPredicted RBP12.42□□□□□ -0.42
COL27A1-204ENST00000477421 LIFRP42702 1097 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 ANTXR2P58335 489 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 SLC44A5Q8NCS7 719 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CUL5Q93034 780 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 ERO1AQ96HE7 468 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 VEZTQ9HBM0 779 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 BAZ2BQ9UIF8 2168 aaKnown RBP12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CTAGE15A4D2H0 777 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 SMCO2A6NFE2 343 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 ARHGAP6O43182 974 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CTAGE8P0CG41 777 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 TERF1P54274 439 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CTAGE6Q86UF2 777 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 CTAGE4Q8IX94 777 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 NELFBQ8WX92 580 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 LY9Q9HBG7 655 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 TECP42680 631 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 SPAG5Q96R06 1193 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 HINFPQ9BQA5 517 aa12.42□□□□□ -0.42
COL27A1-204ENST00000477421 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
COL27A1-204ENST00000477421 USP27XA6NNY8 438 aa12.41□□□□□ -0.42
COL27A1-204ENST00000477421 TMCO5BA8MYB1 307 aa12.41□□□□□ -0.42
COL27A1-204ENST00000477421 FGFR1OPO95684 399 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms