RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 RPAP1Q9BWH6 1393 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-214ENST00000477152 SSC5DA1L4H1 1573 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 RBBP6Q7Z6E9 1792 aaKnown RBP9.01□□□□□ -0.97
BRCA1-214ENST00000477152 PDE4DIPQ5VU43 2346 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.01□□□□□ -0.97
BRCA1-214ENST00000477152 CD99L2Q8TCZ2 262 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 PUS3Q9BZE2 481 aaKnown RBP9.01□□□□□ -0.97
BRCA1-214ENST00000477152 FZD1Q9UP38 647 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 OTOFQ9HC10 1997 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 EYA2O00167 538 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 ATP9BO43861 1147 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 UBTFL1P0CB47 393 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-214ENST00000477152 VGLL4Q14135 290 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 SLC9C1Q4G0N8 1177 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 ARMC2Q8NEN0 867 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 WRNIP1Q96S55 665 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 TMEM39BQ9GZU3 492 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 PCDHAC2Q9Y5I4 1007 aa9.01□□□□□ -0.97
BRCA1-214ENST00000477152 PPATQ06203 517 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 PPIL2Q13356 520 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 SLC4A8Q2Y0W8 1093 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 PLA2G2CQ5R387 149 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 PPP1R3FQ6ZSY5 799 aaPredicted RBP9□□□□□ -0.97
BRCA1-214ENST00000477152 ARMC5Q96C12 935 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 TEPSINQ96N21 525 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 API5Q9BZZ5 524 aaKnown RBP9□□□□□ -0.97
BRCA1-214ENST00000477152 DENND2AQ9ULE3 1009 aa9□□□□□ -0.97
BRCA1-214ENST00000477152 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
BRCA1-214ENST00000477152 CIAO1O76071 339 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 LDHBP07195 334 aaKnown RBP8.99□□□□□ -0.97
BRCA1-214ENST00000477152 SKIP12755 728 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 CAPN2P17655 700 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 LRRC24Q50LG9 513 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 SPTY2D1Q68D10 685 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-214ENST00000477152 FAM151AQ8WW52 585 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 KAZALD1Q96I82 304 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 R3HDMLQ9H3Y0 253 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 SMC4Q9NTJ3 1288 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 TLR2O60603 784 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 ZBTB33Q86T24 672 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 ANKRD44Q8N8A2 993 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 VGLL2Q8N8G2 317 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 USP44Q9H0E7 712 aa8.99□□□□□ -0.97
BRCA1-214ENST00000477152 ZNF521Q96K83 1311 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-214ENST00000477152 AGERQ15109 404 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 ATP2B3Q16720 1220 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 BRI3BPQ8WY22 251 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 SSH1Q8WYL5 1049 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 PTPN18Q99952 460 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 AKAP2Q9Y2D5 859 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 GPSM3Q9Y4H4 160 aa8.98□□□□□ -0.97
BRCA1-214ENST00000477152 FGFR2P21802 821 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 SLFN5Q08AF3 891 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 FASTKD5Q7L8L6 764 aaKnown RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 SH3RF1Q7Z6J0 888 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 ANKRD23Q86SG2 305 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 ZNF511Q8NB15 262 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 TRAIPQ9BWF2 469 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 SALL1Q9NSC2 1324 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 RNF223E7ERA6 249 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 MAP4K4O95819 1239 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 GNAI3P08754 354 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 APOBEC3HQ6NTF7 200 aaKnown RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 USP17L2Q6R6M4 530 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 DZIP1Q86YF9 867 aaKnown RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 GPKOWQ92917 476 aaPredicted RBP eCLIP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 RNF166Q96A37 237 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 PARK7Q99497 189 aaKnown RBP8.97□□□□□ -0.97
BRCA1-214ENST00000477152 PICK1Q9NRD5 415 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 USP40Q9NVE5 1235 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 SNCAIPQ9Y6H5 919 aa8.97□□□□□ -0.97
BRCA1-214ENST00000477152 USP17L5A8MUK1 530 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 CXCL11O14625 94 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 IPO8O15397 1037 aaKnown RBP8.96□□□□□ -0.98
BRCA1-214ENST00000477152 ENTPD3O75355 529 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 CACNB3P54284 484 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 UBXN2AP68543 259 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 LACTBP83111 547 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-214ENST00000477152 FAM43AQ8N2R8 423 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 ZKSCAN4Q969J2 545 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-214ENST00000477152 ZNF333Q96JL9 665 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 TRIM47Q96LD4 638 aa8.96□□□□□ -0.98
BRCA1-214ENST00000477152 BTBD19C9JJ37 291 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 LDHCP07864 332 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 SH3BP2P78314 561 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 GSTO1P78417 241 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 KCNC4Q03721 635 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 SLFNL1Q499Z3 407 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 NOL9Q5SY16 702 aaKnown RBP8.95□□□□□ -0.98
BRCA1-214ENST00000477152 ZSCAN29Q8IWY8 852 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-214ENST00000477152 KLHDC4Q8TBB5 520 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 RAET1EQ8TD07 263 aa8.95□□□□□ -0.98
BRCA1-214ENST00000477152 NOL10Q9BSC4 688 aaKnown RBP8.95□□□□□ -0.98
BRCA1-214ENST00000477152 LRRFIP2Q9Y608 721 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms