RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 NFE2L3Q9Y4A8 694 aa24.08■■□□□ 1.45
LIMS2-214ENST00000476932 BAZ2BQ9UIF8 2168 aaKnown RBP24.08■■□□□ 1.45
LIMS2-214ENST00000476932 TRIM75PA6NK02 468 aa24.08■■□□□ 1.44
LIMS2-214ENST00000476932 TOP1P11387 765 aaKnown RBP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 BARGINQ6ZT62 677 aa24.08■■□□□ 1.44
LIMS2-214ENST00000476932 CATIPQ7Z7H3 387 aa24.08■■□□□ 1.44
LIMS2-214ENST00000476932 TRMT44Q8IYL2 757 aaKnown RBP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 NSUN4Q96CB9 384 aaKnown RBP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 NOL10Q9BSC4 688 aaKnown RBP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 V9GYY5 206 aaPredicted RBP24.08■■□□□ 1.44
LIMS2-214ENST00000476932 SLU7O95391 586 aaKnown RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 PCP11498 1178 aaKnown RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 AKAP17AQ02040 695 aaKnown RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 RBM28Q9NW13 759 aaKnown RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 V9GY48 417 aaPredicted RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 CNTNAP5Q8WYK1 1306 aa24.07■■□□□ 1.44
LIMS2-214ENST00000476932 CCDC93Q567U6 631 aa24.07■■□□□ 1.44
LIMS2-214ENST00000476932 NOM1Q5C9Z4 860 aaKnown RBP24.07■■□□□ 1.44
LIMS2-214ENST00000476932 TMTC3Q6ZXV5 915 aa24.07■■□□□ 1.44
LIMS2-214ENST00000476932 XBP1P17861 261 aa24.06■■□□□ 1.44
LIMS2-214ENST00000476932 KANK3Q6NY19 840 aa24.06■■□□□ 1.44
LIMS2-214ENST00000476932 PRDM10Q9NQV6 1147 aa24.06■■□□□ 1.44
LIMS2-214ENST00000476932 USP17L12C9JPN9 530 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 USP17L21D6R901 530 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 DDAH1O94760 285 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 SLC10A5Q5PT55 438 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 IQCA1Q86XH1 822 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 EPSTI1Q96J88 318 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 FEZ1Q99689 392 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 DACH1Q9UI36 760 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 SEMA3EO15041 775 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 MECOMQ03112 1051 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 TBC1D9BQ66K14 1250 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 TRIM65Q6PJ69 517 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 SMIM5Q71RC9 77 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 REXO1L1PQ8IX06 675 aa24.05■■□□□ 1.44
LIMS2-214ENST00000476932 PDS5AQ29RF7 1337 aaKnown RBP24.05■■□□□ 1.44
LIMS2-214ENST00000476932 FANCGO15287 622 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 ORC4O43929 436 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 PLCD1P51178 756 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 KCNQ4P56696 695 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 ELF2Q15723 593 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 SH3RF1Q7Z6J0 888 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 SBF2Q86WG5 1849 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 TUBB4AP04350 444 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 CALM1P0DP23 149 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 CALM2P0DP24 149 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 CALM3P0DP25 149 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 ETF1P62495 437 aaKnown RBP24.04■■□□□ 1.44
LIMS2-214ENST00000476932 BICDL1Q6ZP65 573 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 LRRN4CLQ8ND94 238 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 DHX58Q96C10 678 aa24.04■■□□□ 1.44
LIMS2-214ENST00000476932 NMT2O60551 498 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 ZSCAN20P17040 1043 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 FCHSD1Q86WN1 690 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 DCP1AQ9NPI6 582 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 SAMSN1Q9NSI8 373 aaKnown RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 CCP110O43303 1012 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 KMT5BQ4FZB7 885 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 SRBD1Q8N5C6 995 aaKnown RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 ZNF397Q8NF99 534 aaPredicted RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 SYMPKQ92797 1274 aaKnown RBP24.03■■□□□ 1.44
LIMS2-214ENST00000476932 PHLPP2Q6ZVD8 1323 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 CNTNAP4Q9C0A0 1308 aa24.03■■□□□ 1.44
LIMS2-214ENST00000476932 TC2NQ8N9U0 490 aa24.02■■□□□ 1.44
LIMS2-214ENST00000476932 SLFN14P0C7P3 912 aa24.01■■□□□ 1.43
LIMS2-214ENST00000476932 ERCC5P28715 1186 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-214ENST00000476932 NUTM2AQ8IVF1 878 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-214ENST00000476932 RGL2O15211 777 aa24.01■■□□□ 1.43
LIMS2-214ENST00000476932 ARHGAP6O43182 974 aa24.01■■□□□ 1.43
LIMS2-214ENST00000476932 APTXQ7Z2E3 356 aaKnown RBP24.01■■□□□ 1.43
LIMS2-214ENST00000476932 FERMT2Q96AC1 680 aa24.01■■□□□ 1.43
LIMS2-214ENST00000476932 PAGE5Q96GU1 130 aa24.01■■□□□ 1.43
LIMS2-214ENST00000476932 DDX41Q9UJV9 622 aaKnown RBP24.01■■□□□ 1.43
LIMS2-214ENST00000476932 CYP2D6P10635 497 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 CD44P16070 742 aaKnown RBP24■■□□□ 1.43
LIMS2-214ENST00000476932 CASP1P29466 404 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 PRDX5P30044 214 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 SPECC1LQ69YQ0 1117 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 FBXO38Q6PIJ6 1188 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 BMP15O95972 392 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 RPS8P62241 208 aaKnown RBP24■■□□□ 1.43
LIMS2-214ENST00000476932 CUL4BQ13620 913 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 TTC38Q5R3I4 469 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 HOMER1Q86YM7 354 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 TFCP2L1Q9NZI6 479 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 OGFRQ9NZT2 677 aa24■■□□□ 1.43
LIMS2-214ENST00000476932 TNRC6CQ9HCJ0 1690 aaKnown RBP24■■□□□ 1.43
LIMS2-214ENST00000476932 AFMP43652 599 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 ATP2C1P98194 919 aaPredicted RBP23.99■■□□□ 1.43
LIMS2-214ENST00000476932 DPYDQ12882 1025 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 ZNF174Q15697 407 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 FAM47AQ5JRC9 791 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.99■■□□□ 1.43
LIMS2-214ENST00000476932 A0A1B0GTH6 734 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 VWA3AA6NCI4 1184 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 ADAMTS3O15072 1205 aa23.99■■□□□ 1.43
LIMS2-214ENST00000476932 CDK11BP21127 795 aaKnown RBP23.99■■□□□ 1.43
LIMS2-214ENST00000476932 NR1I3Q14994 352 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms