RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 PFDN2Q9UHV9 154 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 PRELID1Q9Y255 219 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 LRRFIP2Q9Y608 721 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 BIN1O00499 593 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 WNT7AO00755 349 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 KLHL41O60662 606 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 RPSAP08865 295 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 TRIM21P19474 475 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 ACAP1Q15027 740 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 SASS6Q6UVJ0 657 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 CCDC129Q6ZRS4 1044 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 DGKHQ86XP1 1220 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 TNIP2Q8NFZ5 429 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 SGCDQ92629 289 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 SKA1Q96BD8 255 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 RBM18Q96H35 190 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 MKL2Q9ULH7 1088 aa6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.81□□□□□ -1.32
SPTLC3-205ENST00000476791 AKNAQ7Z591 1439 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 A0A1B0GUL7 405 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 TTC24A2A3L6 582 aaPredicted RBP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 MTHFD1P11586 935 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 U2AF2P26368 475 aaKnown RBP eCLIP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 CLPPQ16740 277 aaPredicted RBP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 LEKR1Q6ZMV7 388 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 GOLGA5Q8TBA6 731 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 BAP1Q92560 729 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 SLC35B4Q969S0 331 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 CEP295NLQ96MC4 621 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 OSBPL2Q9H1P3 480 aa6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 SPATS2LQ9NUQ6 558 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-205ENST00000476791 PRRT4C9JH25 899 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 WNT7BP56706 349 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 BNIP1Q12981 228 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 OSTM1Q86WC4 334 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 KRT222Q8N1A0 295 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 LRRC43Q8N309 656 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 FAM161BQ96MY7 647 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 ZNHIT6Q9NWK9 470 aaKnown RBP6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 TOR4AQ9NXH8 423 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 SAGE1Q9NXZ1 904 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 C21orf2O43822 256 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 NBNO60934 754 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 PECAM1P16284 738 aaPredicted RBP6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 ATF7P17544 494 aaPredicted RBP6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 PRKAR2BP31323 418 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 SEPHS1P49903 392 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 SH3BP2P78314 561 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 ICA1Q05084 483 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 WDR45BQ5MNZ6 344 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 LVRNQ6Q4G3 990 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 PARD3BQ8TEW8 1205 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 TSGA10Q9BZW7 698 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 CEP131Q9UPN4 1083 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 KANK1Q14678 1352 aa6.79□□□□□ -1.32
SPTLC3-205ENST00000476791 KIF2AO00139 706 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 POU3F3P20264 500 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 MCM2P49736 904 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 RAB27AP51159 221 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 CTDSPL2Q05D32 466 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 KIAA0753Q2KHM9 967 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 VWA3BQ502W6 1294 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 DALRD3Q5D0E6 543 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 CATSPER4Q7RTX7 472 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 PCMTD1Q96MG8 357 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 CNNM2Q9H8M5 875 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 PANK3Q9H999 370 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 NGRNQ9NPE2 291 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 TIMM22Q9Y584 194 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 AKR1B15C9JRZ8 316 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 XPOTO43592 962 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 TSPAN6O43657 245 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 F12P00748 615 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 KRT18P05783 430 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 PCP11498 1178 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 RAC2P15153 192 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 PAPOLAP51003 745 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 SEPT7Q16181 437 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 TTC31Q49AM3 519 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 TTLL5Q6EMB2 1281 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 KSR2Q6VAB6 950 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 CCDC186Q7Z3E2 898 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 SPATS2Q86XZ4 545 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 LRRC49Q8IUZ0 686 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 EZH1Q92800 747 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 BRD8Q9H0E9 1235 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 TSPY26PQ9H489 355 aa6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 BICC1Q9H694 974 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-205ENST00000476791 PRPF3O43395 683 aaKnown RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 ZNF254O75437 659 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 DGAT1O75907 488 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 SCGB1D2O95969 90 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 RDXP35241 583 aaKnown RBP6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 RANBP1P43487 201 aa6.77□□□□□ -1.32
SPTLC3-205ENST00000476791 NUCB2P80303 420 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms