RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 POLR3KQ9Y2Y1 108 aaPredicted RBP5.31□□□□□ -1.56
NPHP3-207ENST00000476742 LEFTY1O75610 366 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 HTR3BO95264 441 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 RACK1P63244 317 aaKnown RBP5.3□□□□□ -1.56
NPHP3-207ENST00000476742 LCNL1Q6ZST4 164 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 SIAH1Q8IUQ4 282 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 KSR1Q8IVT5 923 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 XAGE3Q8WTP9 111 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 ACSF2Q96CM8 615 aaPredicted RBP5.3□□□□□ -1.56
NPHP3-207ENST00000476742 EAF1Q96JC9 268 aaPredicted RBP5.3□□□□□ -1.56
NPHP3-207ENST00000476742 SPATA32Q96LK8 384 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 TGIF2Q9GZN2 237 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 REV1Q9UBZ9 1251 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 TPX2Q9ULW0 747 aaKnown RBP5.3□□□□□ -1.56
NPHP3-207ENST00000476742 PCDHB14Q9Y5E9 798 aa5.3□□□□□ -1.56
NPHP3-207ENST00000476742 SLITRK5O94991 958 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 TCF3P15923 654 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 CYP7A1P22680 504 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 CRKP46108 304 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 CHMP4BP1P59074 171 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 LETMD1Q6P1Q0 360 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 SLITRK4Q8IW52 837 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 REXO1Q8N1G1 1221 aaKnown RBP5.29□□□□□ -1.56
NPHP3-207ENST00000476742 DPH2Q9BQC3 489 aaPredicted RBP5.29□□□□□ -1.56
NPHP3-207ENST00000476742 CCSER2Q9H7U1 834 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 MKNK2Q9HBH9 465 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 PRDM5Q9NQX1 630 aaPredicted RBP5.29□□□□□ -1.56
NPHP3-207ENST00000476742 KLHL3Q9UH77 587 aa5.29□□□□□ -1.56
NPHP3-207ENST00000476742 GNAT3A8MTJ3 354 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 IGF2BP3O00425 579 aaKnown RBP eCLIP5.28□□□□□ -1.56
NPHP3-207ENST00000476742 ATE1O95260 518 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 ERCC5P28715 1186 aaPredicted RBP5.28□□□□□ -1.56
NPHP3-207ENST00000476742 HOXA10P31260 410 aaPredicted RBP5.28□□□□□ -1.56
NPHP3-207ENST00000476742 LRRFIP1Q32MZ4 808 aaKnown RBP5.28□□□□□ -1.56
NPHP3-207ENST00000476742 GK5Q6ZS86 529 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 SLFN12Q8IYM2 578 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 COX4I2Q96KJ9 171 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 EHMT1Q9H9B1 1298 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 MAPK8IP1Q9UQF2 711 aa5.28□□□□□ -1.56
NPHP3-207ENST00000476742 UPK3BL1B0FP48 263 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 UPK3BL2E5RIL1 263 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 EOMESO95936 686 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 IMPDH2P12268 514 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 ETV3P41162 512 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 TNNI2P48788 182 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 PAK2Q13177 524 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 COL9A2Q14055 689 aaPredicted RBP5.27□□□□□ -1.57
NPHP3-207ENST00000476742 SFRP5Q5T4F7 317 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 PHACTR4Q8IZ21 702 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 NETO1Q8TDF5 533 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 CYB5D2Q8WUJ1 264 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 CCDC74BQ96LY2 380 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 TOX2Q96NM4 488 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
NPHP3-207ENST00000476742 LMCD1Q9NZU5 365 aa5.27□□□□□ -1.57
NPHP3-207ENST00000476742 ZC3H7BQ9UGR2 993 aaKnown RBP5.27□□□□□ -1.57
NPHP3-207ENST00000476742 ANGEL1Q9UNK9 670 aaKnown RBP5.27□□□□□ -1.57
NPHP3-207ENST00000476742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
NPHP3-207ENST00000476742 SLC22A31A6NKX4 558 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 CHURC1-FNTBB4DL54 471 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 PAPLNO95428 1278 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 CEACAM5P06731 702 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 RAG1P15918 1043 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 GBP1P32455 592 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 OXCT1P55809 520 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 CLCQ05315 142 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 IFI16Q16666 785 aaKnown RBP5.26□□□□□ -1.57
NPHP3-207ENST00000476742 MSMPQ1L6U9 139 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 FAM214BQ7L5A3 538 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 CDH24Q86UP0 819 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 C1QL4Q86Z23 238 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 FAM181AQ8N9Y4 354 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 RIN3Q8TB24 985 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 GPRASP2Q96D09 838 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 MISP3Q96FF7 219 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
NPHP3-207ENST00000476742 FERD3LQ96RJ6 166 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 GMIPQ9P107 970 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 CEP131Q9UPN4 1083 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 INPP5FQ9Y2H2 1132 aa5.26□□□□□ -1.57
NPHP3-207ENST00000476742 TMEM265A0A087WTH1 108 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 FAM155AB1AL88 458 aaPredicted RBP5.25□□□□□ -1.57
NPHP3-207ENST00000476742 ITIH2P19823 946 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 CFPP27918 469 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 KIR3DL1P43629 444 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 GNL2Q13823 731 aaKnown RBP5.25□□□□□ -1.57
NPHP3-207ENST00000476742 ARSHQ5FYA8 562 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 FBXW10Q5XX13 1052 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 VSIG10LQ86VR7 867 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 STK11IPQ8N1F8 1099 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 PLD6Q8N2A8 252 aaKnown RBP5.25□□□□□ -1.57
NPHP3-207ENST00000476742 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
NPHP3-207ENST00000476742 CRBNQ96SW2 442 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 SLC38A3Q99624 504 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 WDR26Q9H7D7 661 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 SNX11Q9Y5W9 270 aa5.25□□□□□ -1.57
NPHP3-207ENST00000476742 PRNPP04156 253 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms