RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 IQSEC3Q9UPP2 1182 aaPredicted RBP8.13□□□□□ -1.11
CLDN4-205ENST00000476494 NCOR2Q9Y618 2525 aa8.13□□□□□ -1.11
CLDN4-205ENST00000476494 GVINP1Q7Z2Y8 2422 aa8.13□□□□□ -1.11
CLDN4-205ENST00000476494 RFX7Q2KHR2 1363 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 ANKRD18BA2A2Z9 1011 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 DDTLA6NHG4 134 aaPredicted RBP8.12□□□□□ -1.11
CLDN4-205ENST00000476494 SEPT4O43236 478 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 LPXNO60711 386 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 CNMDO75829 334 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 RABGGTBP53611 331 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 PTPN5P54829 565 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 FOXO4P98177 505 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 PABPC4Q13310 644 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLDN4-205ENST00000476494 PPIGQ13427 754 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLDN4-205ENST00000476494 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
CLDN4-205ENST00000476494 IDI2Q9BXS1 227 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 TRIM35Q9UPQ4 493 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 ACACBO00763 2458 aa8.12□□□□□ -1.11
CLDN4-205ENST00000476494 DMXL1Q9Y485 3027 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 ATAD5Q96QE3 1844 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 MED19A0JLT2 244 aaPredicted RBP8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PI4KAP2A4QPH2 592 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PROB1E7EW31 1015 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PQBP1O60828 265 aaKnown RBP8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PTPREP23469 700 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 GCKRQ14397 625 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 FAM47AQ5JRC9 791 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PPP2R2DQ66LE6 453 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 KSR2Q6VAB6 950 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PI4KAP1Q8N8J0 262 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 MFSD14AQ96MC6 490 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 PCDHA11Q9Y5I1 949 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 KMT2EQ8IZD2 1858 aa8.11□□□□□ -1.11
CLDN4-205ENST00000476494 A0A1W2PQ45 241 aaPredicted RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 A0A1W2PQY0 241 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 SLC15A5A6NIM6 579 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 C19orf67A6NJJ6 358 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 PLIN1O60240 522 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 TBC1D12O60347 775 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 ENTPD3O75355 529 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 ARHGEF15O94989 841 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 CT47B1P0C2W7 299 aaPredicted RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 IL9P15248 144 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 CDK7P50613 346 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 GNAI1P63096 354 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 ATP2B2Q01814 1243 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 GRB14Q14449 540 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 LEXMQ3ZCV2 418 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 PSRC1Q6PGN9 363 aaPredicted RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 ASCL5Q7RTU5 278 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 BMP8AQ7Z5Y6 402 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 ZNF594Q96JF6 807 aaPredicted RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 IFT57Q9NWB7 429 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 LRRFIP2Q9Y608 721 aaKnown RBP8.1□□□□□ -1.11
CLDN4-205ENST00000476494 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
CLDN4-205ENST00000476494 MAST3O60307 1309 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 COL4A6Q14031 1691 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 GRXCR2A6NFK2 248 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 GTPBP6O43824 516 aaPredicted RBP8.09□□□□□ -1.11
CLDN4-205ENST00000476494 ID4P47928 161 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 RGS3P49796 1198 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 IFIT5Q13325 482 aaKnown RBP8.09□□□□□ -1.11
CLDN4-205ENST00000476494 DIXDC1Q155Q3 683 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 PRAMEF19Q5SWL8 479 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 LDHAL6AQ6ZMR3 332 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 TBC1D2Q9BYX2 928 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 IL23AQ9NPF7 189 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 DDX4Q9NQI0 724 aaKnown RBP8.09□□□□□ -1.11
CLDN4-205ENST00000476494 USP40Q9NVE5 1235 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 FAM86C1Q9NVL1 165 aa8.09□□□□□ -1.11
CLDN4-205ENST00000476494 FASNP49327 2511 aaKnown RBP8.09□□□□□ -1.11
CLDN4-205ENST00000476494 ZNFX1Q9P2E3 1918 aaKnown RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 DCDC2CA8MYV0 355 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 BACE1P56817 501 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 IRX3P78415 501 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 CCSAPQ6IQ19 270 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 SAMD1Q6SPF0 538 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 CNTNAP3BQ96NU0 1288 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 WDR18Q9BV38 432 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 CNTNAP3Q9BZ76 1288 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 OSBPL5Q9H0X9 879 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 UBE2ZQ9H832 354 aaPredicted RBP8.08□□□□□ -1.12
CLDN4-205ENST00000476494 CERS4Q9HA82 394 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 RCAN3Q9UKA8 241 aa8.08□□□□□ -1.12
CLDN4-205ENST00000476494 MAP1BP46821 2468 aaKnown RBP8.07□□□□□ -1.12
CLDN4-205ENST00000476494 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 DDX58O95786 925 aaKnown RBP8.07□□□□□ -1.12
CLDN4-205ENST00000476494 FGBP02675 491 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 NEFLP07196 543 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
CLDN4-205ENST00000476494 CAP2P40123 477 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 JAG1P78504 1218 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 TAP1Q03518 808 aa8.07□□□□□ -1.12
CLDN4-205ENST00000476494 GRB10Q13322 594 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms