RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 XDHP47989 1333 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 AFF2P51816 1311 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 ONECUT3O60422 494 aaPredicted RBP18.34■□□□□ 0.53
VARS2-207ENST00000476162 KRBA2Q6ZNG9 492 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 METTL16Q86W50 562 aaKnown RBP18.34■□□□□ 0.53
VARS2-207ENST00000476162 CNNM3Q8NE01 707 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 WDR66Q8TBY9 1149 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 ANKRD7Q92527 254 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 PHF20Q9BVI0 1012 aa18.34■□□□□ 0.53
VARS2-207ENST00000476162 PDE4BQ07343 736 aa18.33■□□□□ 0.53
VARS2-207ENST00000476162 GRIK5Q16478 980 aa18.33■□□□□ 0.53
VARS2-207ENST00000476162 TMTC3Q6ZXV5 915 aa18.33■□□□□ 0.53
VARS2-207ENST00000476162 FAM205CA6NFA0 338 aa18.33■□□□□ 0.52
VARS2-207ENST00000476162 TSPY2A6NKD2 308 aa18.33■□□□□ 0.52
VARS2-207ENST00000476162 NCAPHQ15003 741 aa18.33■□□□□ 0.52
VARS2-207ENST00000476162 FEZ1Q99689 392 aa18.33■□□□□ 0.52
VARS2-207ENST00000476162 SBF2Q86WG5 1849 aa18.32■□□□□ 0.52
VARS2-207ENST00000476162 ADRA2BP18089 450 aa18.32■□□□□ 0.52
VARS2-207ENST00000476162 ARID5BQ14865 1188 aa18.32■□□□□ 0.52
VARS2-207ENST00000476162 DIXDC1Q155Q3 683 aa18.32■□□□□ 0.52
VARS2-207ENST00000476162 EARS2Q5JPH6 523 aaKnown RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 FOXP4Q8IVH2 680 aaPredicted RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 CTCFLQ8NI51 663 aaPredicted RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 RPGRQ92834 1020 aaKnown RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 MKRN1Q9UHC7 482 aaKnown RBP18.32■□□□□ 0.52
VARS2-207ENST00000476162 KRT2P35908 639 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 USP5P45974 858 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 GPSM2P81274 684 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 ZNF771Q7L3S4 317 aaPredicted RBP18.31■□□□□ 0.52
VARS2-207ENST00000476162 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 FILIP1Q7Z7B0 1213 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 LRRC8AQ8IWT6 810 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
VARS2-207ENST00000476162 CEP131Q9UPN4 1083 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 CCDC88AQ3V6T2 1871 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 MYH6P13533 1939 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 GYS1P13807 737 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 SRPRBQ9Y5M8 271 aaKnown RBP18.31■□□□□ 0.52
VARS2-207ENST00000476162 CNTNAP5Q8WYK1 1306 aa18.31■□□□□ 0.52
VARS2-207ENST00000476162 SMTNL1A8MU46 457 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 FOXN1O15353 648 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 C12orf60Q5U649 245 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 PCDHA5Q9Y5H7 936 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 EP400Q96L91 3159 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 MAST2Q6P0Q8 1798 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 POLR2DO15514 142 aaKnown RBP18.3■□□□□ 0.52
VARS2-207ENST00000476162 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
VARS2-207ENST00000476162 DYNLL2Q96FJ2 89 aa18.3■□□□□ 0.52
VARS2-207ENST00000476162 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
VARS2-207ENST00000476162 DLEC1Q9Y238 1755 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 TRIM75PA6NK02 468 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 SERPINB2P05120 415 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 TPM4P67936 248 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 MDM2Q00987 491 aaPredicted RBP18.29■□□□□ 0.52
VARS2-207ENST00000476162 TFAP4Q01664 338 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 PLCD3Q8N3E9 789 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 OGFRQ9NZT2 677 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 KIAA1551Q9HCM1 1747 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 IKBKBO14920 756 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 SMC2O95347 1197 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 BAG3O95817 575 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 IRX5P78411 483 aaPredicted RBP18.29■□□□□ 0.52
VARS2-207ENST00000476162 GSTO1P78417 241 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 NPY5RQ15761 445 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 C15orf52Q6ZUT6 534 aaKnown RBP18.29■□□□□ 0.52
VARS2-207ENST00000476162 USP49Q70CQ1 688 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 XPO4Q9C0E2 1151 aaKnown RBP18.29■□□□□ 0.52
VARS2-207ENST00000476162 CSRNP2Q9H175 543 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 IFNKQ9P0W0 207 aa18.29■□□□□ 0.52
VARS2-207ENST00000476162 LAMB1P07942 1786 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 UFL1O94874 794 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 CDK11BP21127 795 aaKnown RBP18.28■□□□□ 0.52
VARS2-207ENST00000476162 LMOD1P29536 600 aaPredicted RBP18.28■□□□□ 0.52
VARS2-207ENST00000476162 ST5P78524 1137 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 NOM1Q5C9Z4 860 aaKnown RBP18.28■□□□□ 0.52
VARS2-207ENST00000476162 ELOA2Q8IYF1 753 aaPredicted RBP18.28■□□□□ 0.52
VARS2-207ENST00000476162 TGFBRAP1Q8WUH2 860 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 IL17RBQ9NRM6 502 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 SERTAD1Q9UHV2 236 aa18.28■□□□□ 0.52
VARS2-207ENST00000476162 GABPB1Q06547 395 aaPredicted RBP18.27■□□□□ 0.52
VARS2-207ENST00000476162 PDILTQ8N807 584 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 HSD3B7Q9H2F3 369 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 BRMS1Q9HCU9 246 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 CD209Q9NNX6 404 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 WNT7AO00755 349 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
VARS2-207ENST00000476162 BMP6P22004 513 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 PPP4CP60510 307 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 POSTNQ15063 836 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 TNFRSF25Q93038 417 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
VARS2-207ENST00000476162 HOOK1Q9UJC3 728 aaKnown RBP18.27■□□□□ 0.52
VARS2-207ENST00000476162 BAZ2BQ9UIF8 2168 aaKnown RBP18.27■□□□□ 0.51
VARS2-207ENST00000476162 CTIFO43310 598 aaKnown RBP18.26■□□□□ 0.51
VARS2-207ENST00000476162 NEMFO60524 1076 aa18.26■□□□□ 0.51
VARS2-207ENST00000476162 SCG2P13521 617 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms