RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
NUDCD3-206ENST00000475952 RLFQ13129 1914 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 GLRX3O76003 335 aaKnown RBP13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 GJB1P08034 283 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 ZFYP08048 801 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 CCL5P13501 91 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 RAB3GAP1Q15042 981 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 SHROOM1Q2M3G4 852 aaPredicted RBP13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 SLFNL1Q499Z3 407 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 FEZ1Q99689 392 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 NR2E3Q9Y5X4 410 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 DNAH12Q6ZR08 3092 aa13.7□□□□□ -0.22
NUDCD3-206ENST00000475952 MYPNQ86TC9 1320 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 ZNFX1Q9P2E3 1918 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 MX1P20591 662 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 GRK4P32298 578 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 SHMT1P34896 483 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 GCLCP48506 637 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 MNX1P50219 401 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 IRX3P78415 501 aaPredicted RBP13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 JAG1P78504 1218 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 GABPAQ06546 454 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 FAM110CQ1W6H9 321 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 PUS7LQ9H0K6 701 aaKnown RBP13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 SLC4A4Q9Y6R1 1079 aa13.69□□□□□ -0.22
NUDCD3-206ENST00000475952 PRUNE2Q8WUY3 3088 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 MPHOSPH10O00566 681 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 RNF113AO15541 343 aaKnown RBP13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 PRKAB2O43741 272 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 CHGBP05060 677 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 USP14P54578 494 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 ANKRD13CQ8N6S4 541 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 PI4K2BQ8TCG2 481 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 RAET1EQ8TD07 263 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 APPBP2Q92624 585 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 ASCC2Q9H1I8 757 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
NUDCD3-206ENST00000475952 LAMA4Q16363 1823 aa13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 TNPO2O14787 897 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 CYP2D6P10635 497 aa13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 HOXA7P31268 230 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 OTUD7AQ8TE49 926 aaPredicted RBP13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 FSD1Q9BTV5 496 aa13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
NUDCD3-206ENST00000475952 EVX2Q03828 476 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 PRKCZQ05513 592 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 C12orf60Q5U649 245 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 TMEM179Q6ZVK1 233 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 GTF3C2Q8WUA4 911 aaPredicted RBP13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 C12orf42Q96LP6 360 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 KIAA1683Q9H0B3 1180 aa13.66□□□□□ -0.22
NUDCD3-206ENST00000475952 SALL3Q9BXA9 1300 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 USP17L21D6R901 530 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 GPAA1O43292 621 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 GNAT2P19087 354 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 HERVK_113P62684 666 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 SEPT2Q15019 361 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 COA7Q96BR5 231 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 STRBPQ96SI9 672 aaKnown RBP13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 UNC93B1Q9H1C4 597 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 RWDD1Q9H446 243 aaPredicted RBP13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 EMILIN3Q9NT22 766 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 STAP2Q9UGK3 403 aa13.65□□□□□ -0.22
NUDCD3-206ENST00000475952 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 EVI5O60447 810 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 VCAM1P19320 739 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 UBXN2AP68543 259 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 C16orf86Q6ZW13 317 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 CCDC17Q96LX7 622 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 SH2D4AQ9H788 454 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 MORF4L1Q9UBU8 362 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 BIN2Q9UBW5 565 aaPredicted RBP13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L15C9J2P7 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L13C9JLJ4 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L11C9JVI0 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L18D6R9N7 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L22D6RA61 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L17D6RBQ6 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L19D6RCP7 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 USP17L20D6RJB6 530 aa13.63□□□□□ -0.23
NUDCD3-206ENST00000475952 M0R2C6 588 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms