RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 PLP2Q04941 152 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 PTPN11Q06124 597 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ZNF252P-AS1Q0IIN9 211 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 TRIM26Q12899 539 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 RALGPS1Q5JS13 557 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 LDLRAD1Q5T700 205 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ZBTB37Q5TC79 503 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 MEI1Q5TIA1 1274 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 FAM214BQ7L5A3 538 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 TMPRSS7Q7RTY8 843 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 UBE3DQ7Z6J8 389 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 GGNQ86UU5 652 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 IRF2BP1Q8IU81 584 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ZSCAN29Q8IWY8 852 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 MARCH10Q8NA82 808 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 PPP1R13LQ8WUF5 828 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 DHX38Q92620 1227 aaKnown RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 NECAB3Q96P71 396 aaPredicted RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 GPR20Q99678 358 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 DUSP9Q99956 384 aaKnown RBP1.84□□□□□ -2.11
HDAC9-222ENST00000474742 SGPP1Q9BX95 441 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 MCOLN1Q9GZU1 580 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 RNF32Q9H0A6 362 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 ADAMTS10Q9H324 1103 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 C19orf44Q9H6X5 657 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 C12orf49Q9H741 205 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 C19orf73Q9NVV2 129 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 RTEL1Q9NZ71 1219 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 TMEM59LQ9UK28 342 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 PALD1Q9ULE6 856 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 IRAK3Q9Y616 596 aa1.84□□□□□ -2.11
HDAC9-222ENST00000474742 TRIM13O60858 407 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 PRPF40AO75400 957 aaKnown RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SLITRK5O94991 958 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 USP17L7P0C7H9 530 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SRFP11831 508 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 XRCC5P13010 732 aaKnown RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 INSRRP14616 1297 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 PI3P19957 117 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 LMNB1P20700 586 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 GNA15P30679 374 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 NTF4P34130 210 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 CDK8P49336 464 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 DAB2P98082 770 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 PUM1Q14671 1186 aaKnown RBP eCLIP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 LRRC14Q15048 493 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 ZXDCQ2QGD7 858 aaPredicted RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SKOR2Q2VWA4 1001 aaPredicted RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SPATS1Q496A3 300 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 ALG1LQ6GMV1 187 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 LETMD1Q6P1Q0 360 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 TPTE2Q6XPS3 522 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 PDZRN4Q6ZMN7 1036 aaPredicted RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 HDXQ7Z353 690 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SPPL2CQ8IUH8 684 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SP8Q8IXZ3 490 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 LILRA2Q8N149 483 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 CXorf38Q8TB03 319 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 FEZF2Q8TBJ5 459 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 FBF1Q8TES7 1133 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 ANKRD24Q8TF21 1146 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 XAGE3Q8WTP9 111 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 KCNC2Q96PR1 638 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 TRIT1Q9H3H1 467 aaKnown RBP1.83□□□□□ -2.12
HDAC9-222ENST00000474742 SIRT5Q9NXA8 310 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 PARP2Q9UGN5 583 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 DUSP13Q9UII6 198 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 GPR160Q9UJ42 338 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 AK5Q9Y6K8 562 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 CAPN6Q9Y6Q1 641 aa1.83□□□□□ -2.12
HDAC9-222ENST00000474742 TEX51A0A1B0GUA7 166 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 FITM1A5D6W6 292 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 OR14I1A6ND48 311 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 OTOL1A6NHN0 477 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 PATL2C9JE40 543 aaKnown RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 F6X3S4 739 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 PEX10O60683 326 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 HPXP02790 462 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 TPP2P29144 1249 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 GSTT1P30711 240 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 ETV3P41162 512 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 KIR3DL1P43629 444 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 AFF3P51826 1226 aaKnown RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 CHMP4BP1P59074 171 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 SRSF3P84103 164 aaKnown RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 RING1Q06587 406 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 EGR3Q06889 387 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 INPP5AQ14642 412 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 SSPNQ14714 243 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 CCDC27Q2M243 656 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 EAPPQ56P03 285 aaPredicted RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 LLGL2Q6P1M3 1020 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 HID1Q8IV36 788 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 MFSD2AQ8NA29 543 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 PDZD8Q8NEN9 1154 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 GAL3ST3Q96A11 431 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 INTS4Q96HW7 963 aaKnown RBP1.82□□□□□ -2.12
HDAC9-222ENST00000474742 COX4I2Q96KJ9 171 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 SIGLEC10Q96LC7 697 aa1.82□□□□□ -2.12
HDAC9-222ENST00000474742 BDH2Q9BUT1 245 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms