RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 MFSD2AQ8NA29 543 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 ST13P5Q8NFI4 369 aaPredicted RBP9.29□□□□□ -0.92
SEC22A-204ENST00000473494 ZNF669Q96BR6 464 aaPredicted RBP9.29□□□□□ -0.92
SEC22A-204ENST00000473494 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 MYRFLQ96LU7 910 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 SLC6A18Q96N87 628 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 KIF2CQ99661 725 aa9.29□□□□□ -0.92
SEC22A-204ENST00000473494 MRPL42Q9Y6G3 142 aaKnown RBP9.29□□□□□ -0.92
SEC22A-204ENST00000473494 IREB2P48200 963 aaKnown RBP9.28□□□□□ -0.92
SEC22A-204ENST00000473494 PMS1P54277 932 aaKnown RBP9.28□□□□□ -0.92
SEC22A-204ENST00000473494 IFRD2Q12894 506 aaPredicted RBP9.28□□□□□ -0.92
SEC22A-204ENST00000473494 BBS9Q3SYG4 887 aa9.28□□□□□ -0.92
SEC22A-204ENST00000473494 SGO2Q562F6 1265 aa9.28□□□□□ -0.92
SEC22A-204ENST00000473494 PPFIBP1Q86W92 1011 aa9.28□□□□□ -0.92
SEC22A-204ENST00000473494 SUCOQ9UBS9 1254 aaKnown RBP9.28□□□□□ -0.92
SEC22A-204ENST00000473494 FAM86C2PA6NEL3 165 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 ENPP3O14638 875 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 USP11P51784 963 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 TMEM192Q8IY95 271 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 DNAJB8Q8NHS0 232 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 BAHD1Q8TBE0 780 aaPredicted RBP9.27□□□□□ -0.93
SEC22A-204ENST00000473494 PPP1R13LQ8WUF5 828 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 SMARCC1Q92922 1105 aaPredicted RBP9.27□□□□□ -0.93
SEC22A-204ENST00000473494 DHRS1Q96LJ7 313 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 PSMG3-AS1Q96PY0 264 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.27□□□□□ -0.93
SEC22A-204ENST00000473494 SSU72Q9NP77 194 aaKnown RBP9.27□□□□□ -0.93
SEC22A-204ENST00000473494 DAGLAQ9Y4D2 1042 aa9.27□□□□□ -0.93
SEC22A-204ENST00000473494 KRBA1A5PL33 1030 aa9.26□□□□□ -0.93
SEC22A-204ENST00000473494 SLC7A5Q01650 507 aa9.26□□□□□ -0.93
SEC22A-204ENST00000473494 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
SEC22A-204ENST00000473494 ARMC10Q8N2F6 343 aa9.26□□□□□ -0.93
SEC22A-204ENST00000473494 UTP4Q969X6 686 aaKnown RBP9.26□□□□□ -0.93
SEC22A-204ENST00000473494 RNPC3Q96LT9 517 aaKnown RBP9.26□□□□□ -0.93
SEC22A-204ENST00000473494 PCDHB10Q9UN67 800 aa9.26□□□□□ -0.93
SEC22A-204ENST00000473494 COL17A1Q9UMD9 1497 aaPredicted RBP9.26□□□□□ -0.93
SEC22A-204ENST00000473494 RNF225M0QZC1 329 aaPredicted RBP9.25□□□□□ -0.93
SEC22A-204ENST00000473494 SUSD5O60279 629 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 CLEC3AO75596 197 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 MAP7Q14244 749 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 MTERF2Q49AM1 385 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 EEPD1Q7L9B9 569 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 FAM20CQ8IXL6 584 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 JMYQ8N9B5 988 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 FBLIM1Q8WUP2 373 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 DNAJC7Q99615 494 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 SSBP4Q9BWG4 385 aaPredicted RBP9.25□□□□□ -0.93
SEC22A-204ENST00000473494 EPN3Q9H201 632 aa9.25□□□□□ -0.93
SEC22A-204ENST00000473494 DYNC1LI2O43237 492 aaPredicted RBP9.24□□□□□ -0.93
SEC22A-204ENST00000473494 MAP4P27816 1152 aaKnown RBP9.24□□□□□ -0.93
SEC22A-204ENST00000473494 GBP1P32455 592 aa9.24□□□□□ -0.93
SEC22A-204ENST00000473494 ZNF143P52747 638 aaPredicted RBP9.24□□□□□ -0.93
SEC22A-204ENST00000473494 SLC10A6Q3KNW5 377 aa9.24□□□□□ -0.93
SEC22A-204ENST00000473494 KIAA1211LQ6NV74 962 aa9.24□□□□□ -0.93
SEC22A-204ENST00000473494 XAGE3Q8WTP9 111 aa9.24□□□□□ -0.93
SEC22A-204ENST00000473494 MIPEPQ99797 713 aa9.24□□□□□ -0.93
SEC22A-204ENST00000473494 NFICP08651 508 aa9.23□□□□□ -0.93
SEC22A-204ENST00000473494 GNPTABQ3T906 1256 aa9.23□□□□□ -0.93
SEC22A-204ENST00000473494 LETMD1Q6P1Q0 360 aa9.23□□□□□ -0.93
SEC22A-204ENST00000473494 LILRB2Q8N423 598 aa9.23□□□□□ -0.93
SEC22A-204ENST00000473494 ZMYM5Q9UJ78 669 aa9.23□□□□□ -0.93
SEC22A-204ENST00000473494 C9IYK1 514 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 SLITRK5O94991 958 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 BMP3P12645 472 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 CHRNA4P43681 627 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 C2orf27AQ580R0 203 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 TDRD10Q5VZ19 366 aaKnown RBP9.22□□□□□ -0.93
SEC22A-204ENST00000473494 EGFLAMQ63HQ2 1017 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 PRDM10Q9NQV6 1147 aa9.22□□□□□ -0.93
SEC22A-204ENST00000473494 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 NAT2P11245 290 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 HSD3B2P26439 372 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 ETV3P41162 512 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 RNF4P78317 190 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 TCEAL1Q15170 157 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 SPATC1Q76KD6 591 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 RNF141Q8WVD5 230 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 VWCEQ96DN2 955 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 ASPNQ9BXN1 380 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 C1GALT1Q9NS00 363 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 SUSD2Q9UGT4 822 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 CEP131Q9UPN4 1083 aa9.21□□□□□ -0.94
SEC22A-204ENST00000473494 FAM95CA0A1B0GW59 222 aa9.2□□□□□ -0.94
SEC22A-204ENST00000473494 CBFA2T2O43439 604 aa9.2□□□□□ -0.94
SEC22A-204ENST00000473494 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
SEC22A-204ENST00000473494 THAP3Q8WTV1 239 aaPredicted RBP9.2□□□□□ -0.94
SEC22A-204ENST00000473494 KREMEN1Q96MU8 473 aa9.2□□□□□ -0.94
SEC22A-204ENST00000473494 HAUS7Q99871 368 aa9.2□□□□□ -0.94
SEC22A-204ENST00000473494 KLHL25Q9H0H3 589 aa9.2□□□□□ -0.94
SEC22A-204ENST00000473494 DHX15O43143 795 aaKnown RBP9.19□□□□□ -0.94
SEC22A-204ENST00000473494 RXRBP28702 533 aa9.19□□□□□ -0.94
SEC22A-204ENST00000473494 SSRP1Q08945 709 aaKnown RBP9.19□□□□□ -0.94
SEC22A-204ENST00000473494 CDK5R2Q13319 367 aa9.19□□□□□ -0.94
SEC22A-204ENST00000473494 AXDND1Q5T1B0 1012 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-204ENST00000473494 NBPF12Q5TAG4 269 aaPredicted RBP9.19□□□□□ -0.94
SEC22A-204ENST00000473494 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
SEC22A-204ENST00000473494 TMEM260Q9NX78 707 aa9.19□□□□□ -0.94
SEC22A-204ENST00000473494 ANKRD34BA5PLL1 514 aa9.18□□□□□ -0.94
SEC22A-204ENST00000473494 SHOXO15266 292 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms