RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 MAML3Q96JK9 1138 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 GID8Q9NWU2 228 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 SSX2IPQ9Y2D8 614 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 TRIM17Q9Y577 477 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 UBA7P41226 1012 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 SERPINB4P48594 390 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 EPHB4P54760 987 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 MRRFQ96E11 262 aaKnown RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 WARS2Q9UGM6 360 aaKnown RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 CCDC144AA2RUR9 1427 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 SYCE1LA8MT33 242 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 ATP5HO75947 161 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 STK10O94804 968 aaKnown RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 CCT6AP40227 531 aaKnown RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 CORO7P57737 925 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 MFN1Q8IWA4 741 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 PPWD1Q96BP3 646 aaKnown RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 ASCC2Q9H1I8 757 aaPredicted RBP9.91□□□□□ -0.82
COL6A3-210ENST00000473258 CD2APQ9Y5K6 639 aa9.91□□□□□ -0.82
COL6A3-210ENST00000473258 IL9RQ01113 521 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 ARID5AQ03989 594 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 CCDC14Q49A88 953 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 CEP85Q6P2H3 762 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 FAM186BQ8IYM0 893 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 ZGPATQ8N5A5 531 aaKnown RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 SPTLC3Q9NUV7 552 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 H0YC42 278 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 TTC4O95801 387 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 KRT3P12035 628 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 PAX7P23759 505 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 HDAC4P56524 1084 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 PDE1BQ01064 536 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 MLECQ14165 292 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 RAPGEF4Q8WZA2 1011 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 TSR2Q969E8 191 aaKnown RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 POLR3CQ9BUI4 534 aaPredicted RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 MEFVO15553 781 aaPredicted RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 SERPINB1P30740 379 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 MLH1P40692 756 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 AFMP43652 599 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 CARSP49589 748 aaKnown RBP9.9□□□□□ -0.82
COL6A3-210ENST00000473258 CYTH2Q99418 400 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 CLSTN2Q9H4D0 955 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 TCP11L1Q9NUJ3 509 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 PPP2R2CQ9Y2T4 447 aa9.9□□□□□ -0.82
COL6A3-210ENST00000473258 ENOX1Q8TC92 643 aaKnown RBP9.9□□□□□ -0.83
COL6A3-210ENST00000473258 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.9□□□□□ -0.83
COL6A3-210ENST00000473258 RIOK1Q9BRS2 568 aaKnown RBP9.9□□□□□ -0.83
COL6A3-210ENST00000473258 FGFR1OP2Q9NVK5 253 aa9.9□□□□□ -0.83
COL6A3-210ENST00000473258 CARD8Q9Y2G2 431 aa9.9□□□□□ -0.83
COL6A3-210ENST00000473258 RAB14P61106 215 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 MRPL28Q13084 256 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PRKG1Q13976 671 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 ALS2CLQ60I27 953 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 LRGUKQ96M69 825 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PHLPP2Q6ZVD8 1323 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 LRPPRCP42704 1394 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 SPTLC2O15270 562 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 IGHDP01880 384 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CCT2P78371 535 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 LONP2Q86WA8 852 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 HORMAD1Q86X24 394 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CCDC13Q8IYE1 715 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 TUBGCP3Q96CW5 907 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 C6orf203Q9P0P8 240 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 TMEM191CA6NGB0 347 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 TMEM191BP0C7N4 346 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PDE6AP16499 860 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PPP2R1AP30153 589 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 HSPA9P38646 679 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 AACSQ86V21 672 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CCDC124Q96CT7 223 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 FAM129AQ9BZQ8 928 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 KLHL25Q9H0H3 589 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 EHD2Q9NZN4 543 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 ASIC3Q9UHC3 531 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 BZW2Q9Y6E2 419 aaKnown RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 SESN1Q9Y6P5 492 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 KCNA3P22001 575 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 STX17P56962 302 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 DAB2P98082 770 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 RCN2Q14257 317 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 TMEM266Q2M3C6 531 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 DDHD1Q8NEL9 900 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CALML6Q8TD86 181 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 LEO1Q8WVC0 666 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 MAIP1Q8WWC4 291 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CCT6BQ92526 530 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CALML4Q96GE6 196 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 MTRQ99707 1265 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 CAB39Q9Y376 341 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PCP4L1A6NKN8 68 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-210ENST00000473258 BMP15O95972 392 aa9.89□□□□□ -0.83
COL6A3-210ENST00000473258 KCNA2P16389 499 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms