RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 HPS5Q9UPZ3 1129 aa14.11□□□□□ -0.15
CCDC13-204ENST00000472921 SLC12A7Q9Y666 1083 aa14.11□□□□□ -0.15
CCDC13-204ENST00000472921 FAM196BA6NMK8 535 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 NMT2O60551 498 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 LARGE1O95461 756 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 TTLL1O95922 423 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 TROAPQ12815 778 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 LDHDQ86WU2 507 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 GTF3C6Q969F1 213 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 TMEM47Q9BQJ4 181 aa14.1□□□□□ -0.15
CCDC13-204ENST00000472921 LARP6Q9BRS8 491 aaKnown RBP14.1□□□□□ -0.15
CCDC13-204ENST00000472921 SLKQ9H2G2 1235 aaPredicted RBP14.1□□□□□ -0.15
CCDC13-204ENST00000472921 ZBTB43O43298 467 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 DHX16O60231 1041 aaKnown RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 DDAH1O94760 285 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 ASNSP08243 561 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 TOP1P11387 765 aaKnown RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 ST3GAL1Q11201 340 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 SCRN1Q12765 414 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 MAP3K11Q16584 847 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 EAPPQ56P03 285 aaPredicted RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 CATIPQ7Z7H3 387 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 USP48Q86UV5 1035 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 SIAH1Q8IUQ4 282 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 ZNF654Q8IZM8 581 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 KLRG1Q96E93 195 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 LLPHQ9BRT6 129 aaKnown RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 KAT14Q9H8E8 782 aa14.09□□□□□ -0.15
CCDC13-204ENST00000472921 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.09□□□□□ -0.15
CCDC13-204ENST00000472921 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 UNCXA6NJT0 531 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 ADM5C9JUS6 153 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 MPHOSPH10O00566 681 aaKnown RBP14.08□□□□□ -0.16
CCDC13-204ENST00000472921 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
CCDC13-204ENST00000472921 GH2P01242 217 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 JAG1P78504 1218 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 NOL9Q5SY16 702 aaKnown RBP14.08□□□□□ -0.16
CCDC13-204ENST00000472921 NOL8Q76FK4 1167 aaKnown RBP14.08□□□□□ -0.16
CCDC13-204ENST00000472921 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 PNMA1Q8ND90 353 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 FAM217BQ9NTX9 383 aaPredicted RBP14.08□□□□□ -0.16
CCDC13-204ENST00000472921 ZBTB21Q9ULJ3 1066 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 STX8Q9UNK0 236 aa14.08□□□□□ -0.16
CCDC13-204ENST00000472921 GOLGA8BA8MQT2 603 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 PPP1R12BO60237 982 aaPredicted RBP14.07□□□□□ -0.16
CCDC13-204ENST00000472921 GDF11O95390 407 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 SNHG28P0DPA3 235 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 NF2P35240 595 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 METAP2P50579 478 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC13-204ENST00000472921 SEPT2Q15019 361 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 PRAMEF18Q5VWM3 479 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.16
CCDC13-204ENST00000472921 SMARCC2Q8TAQ2 1214 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 CDCA5Q96FF9 252 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
CCDC13-204ENST00000472921 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 SSC5DA1L4H1 1573 aa14.07□□□□□ -0.16
CCDC13-204ENST00000472921 GREB1LQ9C091 1923 aaPredicted RBP14.07□□□□□ -0.16
CCDC13-204ENST00000472921 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
CCDC13-204ENST00000472921 DDIT3P35638 169 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 ICA1Q05084 483 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 STK3Q13188 491 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 NTRK3Q16288 839 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 SCYL3Q8IZE3 742 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 NECAB1Q8N987 351 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 GMCL1P1Q8NEA9 526 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 NMRK2Q9NPI5 230 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
CCDC13-204ENST00000472921 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 GOLGA8AA7E2F4 631 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 POTEIP0CG38 1075 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 PDIA4P13667 645 aaKnown RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 SMARCA1P28370 1054 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 CDC27P30260 824 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 ADD1P35611 737 aaKnown RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 GNAQP50148 359 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 CCT2P78371 535 aaKnown RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 MAP3K9P80192 1104 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 GRM4Q14833 912 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 SHROOM1Q2M3G4 852 aaPredicted RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 CPLX2Q6PUV4 134 aaKnown RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 RGS22Q8NE09 1264 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 WDR18Q9BV38 432 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 GLIS2Q9BZE0 524 aaPredicted RBP14.05□□□□□ -0.16
CCDC13-204ENST00000472921 ARHGEF10LQ9HCE6 1279 aa14.05□□□□□ -0.16
CCDC13-204ENST00000472921 USP17L5A8MUK1 530 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 CDKL5O76039 1030 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 CTDNEP1O95476 244 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 HSP90AA1P07900 732 aaKnown RBP14.04□□□□□ -0.16
CCDC13-204ENST00000472921 IFNAR1P17181 557 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 INPP5BP32019 993 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 KIF5BP33176 963 aa14.04□□□□□ -0.16
CCDC13-204ENST00000472921 IREB2P48200 963 aaKnown RBP14.04□□□□□ -0.16
CCDC13-204ENST00000472921 FKBP1BP68106 108 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms