RNA–Protein interactions for RNA: ENST00000472659.1

PKD1-209, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 661 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-209ENST00000472659 FAM110CQ1W6H9 321 aa22.33■■□□□ 1.17
PKD1-209ENST00000472659 ZMYM1Q5SVZ6 1142 aa22.33■■□□□ 1.17
PKD1-209ENST00000472659 USP17L2Q6R6M4 530 aa22.33■■□□□ 1.17
PKD1-209ENST00000472659 ANKRD13CQ8N6S4 541 aa22.33■■□□□ 1.17
PKD1-209ENST00000472659 CABP5Q9NP86 173 aa22.33■■□□□ 1.17
PKD1-209ENST00000472659 NUCB1Q02818 461 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 SBK1Q52WX2 424 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 AMOTL1Q8IY63 956 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 SEC62Q99442 399 aaKnown RBP22.32■■□□□ 1.16
PKD1-209ENST00000472659 FEZ1Q99689 392 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 SRRDQ9UH36 339 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 ROBO3Q96MS0 1386 aa22.32■■□□□ 1.16
PKD1-209ENST00000472659 RBBP6Q7Z6E9 1792 aaKnown RBP22.32■■□□□ 1.16
PKD1-209ENST00000472659 ECM2O94769 699 aaPredicted RBP22.31■■□□□ 1.16
PKD1-209ENST00000472659 FMNL1O95466 1100 aaPredicted RBP22.31■■□□□ 1.16
PKD1-209ENST00000472659 GNAT2P19087 354 aa22.31■■□□□ 1.16
PKD1-209ENST00000472659 GCLCP48506 637 aaPredicted RBP22.31■■□□□ 1.16
PKD1-209ENST00000472659 CDK8P49336 464 aa22.31■■□□□ 1.16
PKD1-209ENST00000472659 FCGRTP55899 365 aa22.31■■□□□ 1.16
PKD1-209ENST00000472659 B4GALNT3Q6L9W6 998 aa22.31■■□□□ 1.16
PKD1-209ENST00000472659 TMEM179Q6ZVK1 233 aa22.31■■□□□ 1.16
PKD1-209ENST00000472659 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
PKD1-209ENST00000472659 AKR1B1P15121 316 aa22.3■■□□□ 1.16
PKD1-209ENST00000472659 IRX3P78415 501 aaPredicted RBP22.3■■□□□ 1.16
PKD1-209ENST00000472659 ZYXQ15942 572 aaKnown RBP22.3■■□□□ 1.16
PKD1-209ENST00000472659 EVI5LQ96CN4 794 aa22.3■■□□□ 1.16
PKD1-209ENST00000472659 ZNF333Q96JL9 665 aa22.3■■□□□ 1.16
PKD1-209ENST00000472659 GREB1LQ9C091 1923 aaPredicted RBP22.29■■□□□ 1.16
PKD1-209ENST00000472659 A0A1W2PRG0 241 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 VCAM1P19320 739 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 USP14P54578 494 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 HERVK_113P62684 666 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 PRPF38BQ5VTL8 546 aaKnown RBP22.29■■□□□ 1.16
PKD1-209ENST00000472659 CCDC17Q96LX7 622 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 P2RX7Q99572 595 aaKnown RBP22.29■■□□□ 1.16
PKD1-209ENST00000472659 MORF4L1Q9UBU8 362 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 MYPNQ86TC9 1320 aa22.29■■□□□ 1.16
PKD1-209ENST00000472659 PATL2C9JE40 543 aaKnown RBP22.28■■□□□ 1.16
PKD1-209ENST00000472659 HOXD10P28358 340 aa22.28■■□□□ 1.16
PKD1-209ENST00000472659 IRX6P78412 446 aaPredicted RBP22.28■■□□□ 1.16
PKD1-209ENST00000472659 PRKCZQ05513 592 aa22.28■■□□□ 1.16
PKD1-209ENST00000472659 POTEEQ6S8J3 1075 aa22.28■■□□□ 1.16
PKD1-209ENST00000472659 SIAH1Q8IUQ4 282 aa22.28■■□□□ 1.16
PKD1-209ENST00000472659 OSBPL3Q9H4L5 887 aa22.28■■□□□ 1.16
PKD1-209ENST00000472659 MKI67P46013 3256 aaKnown RBP22.27■■□□□ 1.16
PKD1-209ENST00000472659 FOXP2O15409 715 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 TICAM2Q86XR7 235 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 CLEC10AQ8IUN9 316 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 PLEKHM2Q8IWE5 1019 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 TXNRD2Q9NNW7 524 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 GABRQQ9UN88 632 aa22.27■■□□□ 1.16
PKD1-209ENST00000472659 TDO2P48775 406 aa22.26■■□□□ 1.15
PKD1-209ENST00000472659 IFNL3Q8IZI9 196 aa22.26■■□□□ 1.15
PKD1-209ENST00000472659 SH3TC2Q8TF17 1288 aa22.26■■□□□ 1.15
PKD1-209ENST00000472659 USP17L15C9J2P7 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L13C9JLJ4 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L11C9JVI0 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L18D6R9N7 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L22D6RA61 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L17D6RBQ6 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L19D6RCP7 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L20D6RJB6 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 TNPO2O14787 897 aaKnown RBP22.25■■□□□ 1.15
PKD1-209ENST00000472659 ICA1Q05084 483 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 USP17L24Q0WX57 530 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
PKD1-209ENST00000472659 RBPJLQ9UBG7 517 aa22.25■■□□□ 1.15
PKD1-209ENST00000472659 POTEFA5A3E0 1075 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 MINDY4BA8MYZ0 360 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 PEX10O60683 326 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 APPP05067 770 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 RASA1P20936 1047 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 CATSPERGQ6ZRH7 1159 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 CCDC129Q6ZRS4 1044 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 RAET1EQ8TD07 263 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 GTF3C2Q8WUA4 911 aaPredicted RBP22.24■■□□□ 1.15
PKD1-209ENST00000472659 RPAP3Q9H6T3 665 aaPredicted RBP22.24■■□□□ 1.15
PKD1-209ENST00000472659 TMX2Q9Y320 296 aa22.24■■□□□ 1.15
PKD1-209ENST00000472659 FLT3LGP49771 235 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 KIAA1755Q5JYT7 1200 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 LBX2Q6XYB7 198 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 NACAP1Q9BZK3 213 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 A0A0G2JMZ2 1700 aa22.23■■□□□ 1.15
PKD1-209ENST00000472659 PLXNB2O15031 1838 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 RLFQ13129 1914 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 A0A0D9SFI3 127 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 GRK4P32298 578 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 IRF5Q13568 498 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 GPRC5AQ8NFJ5 357 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 FAM227BQ96M60 508 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 KANSL2Q9H9L4 492 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 HELLSQ9NRZ9 838 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 DOCK3Q8IZD9 2030 aa22.22■■□□□ 1.15
PKD1-209ENST00000472659 CNMDO75829 334 aa22.21■■□□□ 1.15
PKD1-209ENST00000472659 ERVK-9P63128 1117 aa22.21■■□□□ 1.15
PKD1-209ENST00000472659 ERVK-24P63145 666 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms