RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 G2E3Q7L622 706 aa7.36□□□□□ -1.23
SIK3-208ENST00000472648 PCGF6Q9BYE7 350 aa7.36□□□□□ -1.23
SIK3-208ENST00000472648 PUS3Q9BZE2 481 aaKnown RBP7.36□□□□□ -1.23
SIK3-208ENST00000472648 RBPJLQ9UBG7 517 aa7.36□□□□□ -1.23
SIK3-208ENST00000472648 SIP14410 1827 aa7.36□□□□□ -1.23
SIK3-208ENST00000472648 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 ZNF521Q96K83 1311 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 KIF16BQ96L93 1317 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 TBC1D12O60347 775 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 TIMP1P01033 207 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 HOXC6P09630 235 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 IFIT1P09914 478 aaKnown RBP7.35□□□□□ -1.23
SIK3-208ENST00000472648 ALADP13716 330 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 CAP2P40123 477 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 BACE1P56817 501 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 FLIIQ13045 1269 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 GRB14Q14449 540 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 TMEM240Q5SV17 173 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 RASIP1Q5U651 963 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 MFSD5Q6N075 450 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 DPP9Q86TI2 863 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 NPLOC4Q8TAT6 608 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 HLA-CQ95604 372 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
SIK3-208ENST00000472648 MYO5AQ9Y4I1 1855 aaKnown RBP7.34□□□□□ -1.23
SIK3-208ENST00000472648 A0A1W2PQ45 241 aaPredicted RBP7.34□□□□□ -1.23
SIK3-208ENST00000472648 A0A1W2PQY0 241 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 C19orf81C9J6K1 198 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 PDE8BO95263 885 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 SLC4A2P04920 1241 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 FAAP100Q0VG06 881 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
SIK3-208ENST00000472648 FAM47AQ5JRC9 791 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 ZNF365Q70YC5 407 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 RNF180Q86T96 592 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 TMEM199Q8N511 208 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 TSPYL6Q8N831 410 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 XPNPEP3Q9NQH7 507 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 DDX4Q9NQI0 724 aaKnown RBP7.34□□□□□ -1.23
SIK3-208ENST00000472648 YBX2Q9Y2T7 364 aaKnown RBP7.34□□□□□ -1.23
SIK3-208ENST00000472648 RABGAP1Q9Y3P9 1069 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 MTCH2Q9Y6C9 303 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 TANC1Q9C0D5 1861 aa7.34□□□□□ -1.23
SIK3-208ENST00000472648 MROH7Q68CQ1 1323 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 PLXNA3P51805 1871 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 USP17L10C9JJH3 530 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 GRM8O00222 908 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 ASNSP08243 561 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 ACRP10323 421 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 RARBP10826 455 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 SLC5A1P13866 664 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 CSF2RAP15509 400 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 SSTR3P32745 418 aaPredicted RBP7.33□□□□□ -1.24
SIK3-208ENST00000472648 WDR43Q15061 677 aaKnown RBP eCLIP7.33□□□□□ -1.24
SIK3-208ENST00000472648 OLFML2BQ68BL8 750 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 C16orf59Q7L2K0 433 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 ANKRD33Q7Z3H0 272 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
SIK3-208ENST00000472648 SLF2Q8IX21 1173 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 TOX2Q96NM4 488 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 WDR18Q9BV38 432 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 CD320Q9NPF0 282 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 STARD7Q9NQZ5 370 aa7.33□□□□□ -1.24
SIK3-208ENST00000472648 C9orf78Q9NZ63 289 aaPredicted RBP7.33□□□□□ -1.24
SIK3-208ENST00000472648 GAKO14976 1311 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 LRRC24Q50LG9 513 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 GJD3Q8N144 294 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 ZGPATQ8N5A5 531 aaKnown RBP7.32□□□□□ -1.24
SIK3-208ENST00000472648 VGLL2Q8N8G2 317 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 NUP133Q8WUM0 1156 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 IL23AQ9NPF7 189 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 HERC5Q9UII4 1024 aaKnown RBP7.32□□□□□ -1.24
SIK3-208ENST00000472648 TBX21Q9UL17 535 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 PCDHA11Q9Y5I1 949 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 DCHS1Q96JQ0 3298 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 NLRC5Q86WI3 1866 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 NAV1Q8NEY1 1877 aa7.32□□□□□ -1.24
SIK3-208ENST00000472648 SALL1Q9NSC2 1324 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 RFXAPO00287 272 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 CNMDO75829 334 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 PGK1P00558 417 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 IGHA2P01877 340 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 POU3F3P20264 500 aaPredicted RBP7.31□□□□□ -1.24
SIK3-208ENST00000472648 ADORA2AP29274 412 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 BTDP43251 543 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 RABGGTBP53611 331 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 TWISTNBQ3B726 338 aaPredicted RBP7.31□□□□□ -1.24
SIK3-208ENST00000472648 PRAMEF19Q5SWL8 479 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 USP17L2Q6R6M4 530 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 PHOX2BQ99453 314 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 PPP1R12CQ9BZL4 782 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 GNL3LQ9NVN8 582 aaKnown RBP7.31□□□□□ -1.24
SIK3-208ENST00000472648 SLC5A4Q9NY91 659 aa7.31□□□□□ -1.24
SIK3-208ENST00000472648 MROH7-TTC4A0A0A0MT08 1334 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L15C9J2P7 530 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L13C9JLJ4 530 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L11C9JVI0 530 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L18D6R9N7 530 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L22D6RA61 530 aa7.3□□□□□ -1.24
SIK3-208ENST00000472648 USP17L17D6RBQ6 530 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms