RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 PPP4CP60510 307 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 GSE1Q14687 1217 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 TJAP1Q5JTD0 557 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 MAPKAPK5Q8IW41 473 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 GPRC5AQ8NFJ5 357 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 TGFBRAP1Q8WUH2 860 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 AS3MTQ9HBK9 375 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
VCL-204ENST00000472585 SIPA1L1O43166 1804 aa11.49□□□□□ -0.57
VCL-204ENST00000472585 MAPK4P31152 587 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 ERVK-9P63128 1117 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 ERVK-24P63145 666 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 DYNLL1P63167 89 aaKnown RBP11.48□□□□□ -0.57
VCL-204ENST00000472585 GSTO1P78417 241 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
VCL-204ENST00000472585 SHHQ15465 462 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 GPR142Q7Z601 462 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 CIZ1Q9ULV3 898 aaPredicted RBP11.48□□□□□ -0.57
VCL-204ENST00000472585 NDUFB9Q9Y6M9 179 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 NCOR1O75376 2440 aa11.48□□□□□ -0.57
VCL-204ENST00000472585 LTBP2Q14767 1821 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 FLT1P17948 1338 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 USP17L10C9JJH3 530 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 IGHA2P01877 340 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 CNGA1P29973 690 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 MFSD14CQ5VZR4 134 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
VCL-204ENST00000472585 ARHGAP45Q92619 1136 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 FAM122AQ96E09 287 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 DBNDD2Q9BQY9 259 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 DHX36Q9H2U1 1008 aaKnown RBP11.47□□□□□ -0.57
VCL-204ENST00000472585 PIH1D3Q9NQM4 214 aaKnown RBP11.47□□□□□ -0.57
VCL-204ENST00000472585 SAP30BPQ9UHR5 308 aaKnown RBP11.47□□□□□ -0.57
VCL-204ENST00000472585 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 ATP11BQ9Y2G3 1177 aa11.47□□□□□ -0.57
VCL-204ENST00000472585 TMEM265A0A087WTH1 108 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 C19orf81C9J6K1 198 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 MSCO60682 206 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 ASNSP08243 561 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 GNAI3P08754 354 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.57
VCL-204ENST00000472585 TRIM27P14373 513 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 RTP1P59025 263 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 GORABQ5T7V8 394 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 NAA16Q6N069 864 aaPredicted RBP11.46□□□□□ -0.57
VCL-204ENST00000472585 PLEKHH3Q7Z736 793 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 TRPV1Q8NER1 839 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 APBA2Q99767 749 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 PAGR1Q9BTK6 254 aa11.46□□□□□ -0.57
VCL-204ENST00000472585 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.57
VCL-204ENST00000472585 PRDM5Q9NQX1 630 aaPredicted RBP11.46□□□□□ -0.57
VCL-204ENST00000472585 BCAR3O75815 825 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
VCL-204ENST00000472585 GH2P01242 217 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 PLA2G5P39877 138 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 ZAP70P43403 619 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 NPLOC4Q8TAT6 608 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 ACER1Q8TDN7 264 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
VCL-204ENST00000472585 BTBD7Q9P203 1132 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 RAPGEFL1Q9UHV5 662 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 MYO9BQ13459 2157 aa11.45□□□□□ -0.58
VCL-204ENST00000472585 BDP1A6H8Y1 2624 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 DNM1LO00429 736 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 GNAI2P04899 355 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 UQCRFS1P1P0C7P4 283 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 GUCY1A2P33402 732 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 G3BP1Q13283 466 aaKnown RBP eCLIP11.44□□□□□ -0.582e-7■■■■□ 23.2
VCL-204ENST00000472585 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
VCL-204ENST00000472585 TNNI3KQ59H18 835 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 TATDN1Q6P1N9 297 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 GTF3C2Q8WUA4 911 aaPredicted RBP11.44□□□□□ -0.58
VCL-204ENST00000472585 LPAR1Q92633 364 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 BADQ92934 168 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 EDC3Q96F86 508 aaKnown RBP11.44□□□□□ -0.58
VCL-204ENST00000472585 DDX20Q9UHI6 824 aaKnown RBP11.44□□□□□ -0.58
VCL-204ENST00000472585 FPGT-TNNI3KV9GXZ4 949 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 CDH23Q9H251 3354 aa11.44□□□□□ -0.58
VCL-204ENST00000472585 RLFQ13129 1914 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 MUC3AQ02505 3323 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 KBTBD13C9JR72 458 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 BAG3O95817 575 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 PTPREP23469 700 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 CYP2C19P33261 490 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 ATP2B2Q01814 1243 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 MAP2K5Q13163 448 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 USP17L2Q6R6M4 530 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 CRACR2BQ8N4Y2 399 aaPredicted RBP11.43□□□□□ -0.58
VCL-204ENST00000472585 MIGA1Q8NAN2 632 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 ARRDC4Q8NCT1 418 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 CLUAP1Q96AJ1 413 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
VCL-204ENST00000472585 GPR108Q9NPR9 543 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms