RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
COL4A3-205ENST00000471862 GJD2Q9UKL4 321 aa13.89□□□□□ -0.19
COL4A3-205ENST00000471862 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
COL4A3-205ENST00000471862 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
COL4A3-205ENST00000471862 RLFQ13129 1914 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 PEX10O60683 326 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 UBXN2AP68543 259 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 ZYXQ15942 572 aaKnown RBP13.88□□□□□ -0.19
COL4A3-205ENST00000471862 C12orf60Q5U649 245 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 PI4K2BQ8TCG2 481 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 GTF3C2Q8WUA4 911 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-205ENST00000471862 DYNLL2Q96FJ2 89 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 FEZ1Q99689 392 aa13.88□□□□□ -0.19
COL4A3-205ENST00000471862 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
COL4A3-205ENST00000471862 CYP2D7A0A087X1C5 515 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L15C9J2P7 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L13C9JLJ4 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L11C9JVI0 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L21D6R901 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L18D6R9N7 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L22D6RA61 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L17D6RBQ6 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L19D6RCP7 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L20D6RJB6 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 GJB1P08034 283 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 CCL5P13501 91 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 ELNP15502 786 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 VCAM1P19320 739 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 GJA8P48165 433 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 USP17L24Q0WX57 530 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 Q3C1V9 767 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 CATSPERGQ6ZRH7 1159 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 C16orf86Q6ZW13 317 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 OTUD7AQ8TE49 926 aaPredicted RBP13.87□□□□□ -0.19
COL4A3-205ENST00000471862 APPBP2Q92624 585 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 OSBP2Q969R2 916 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 STRBPQ96SI9 672 aaKnown RBP13.87□□□□□ -0.19
COL4A3-205ENST00000471862 SLC4A4Q9Y6R1 1079 aa13.87□□□□□ -0.19
COL4A3-205ENST00000471862 PARP14Q460N5 1801 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 CNMDO75829 334 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 INHAP05111 366 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 AKR1B1P15121 316 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 ERVK-9P63128 1117 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 ERVK-24P63145 666 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 LBX2Q6XYB7 198 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 SIAH1Q8IUQ4 282 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 GPRC5AQ8NFJ5 357 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 A0A0G2JMZ2 1700 aa13.86□□□□□ -0.19
COL4A3-205ENST00000471862 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 RNF113AO15541 343 aaKnown RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 ZFYP08048 801 aaPredicted RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 CDK8P49336 464 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 SBK1Q52WX2 424 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 GIMAP6Q6P9H5 292 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 UBE2Q1Q7Z7E8 422 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 NKX2-3Q8TAU0 364 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 CCDC17Q96LX7 622 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 RNF208Q9H0X6 261 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 PORCNQ9H237 461 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 BIN2Q9UBW5 565 aaPredicted RBP13.85□□□□□ -0.19
COL4A3-205ENST00000471862 RABGAP1Q9Y3P9 1069 aa13.85□□□□□ -0.19
COL4A3-205ENST00000471862 ROBO3Q96MS0 1386 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 SPDYE16A6NNV3 312 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-205ENST00000471862 MPHOSPH10O00566 681 aaKnown RBP13.84□□□□□ -0.19
COL4A3-205ENST00000471862 ERC2O15083 957 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 GPAA1O43292 621 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 MAPK4P31152 587 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 KIAA1755Q5JYT7 1200 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 CLEC10AQ8IUN9 316 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 AMOTL1Q8IY63 956 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 USP6NLQ92738 828 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 DDRGK1Q96HY6 314 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 PAGR1Q9BTK6 254 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 RPAP3Q9H6T3 665 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-205ENST00000471862 EPB41L4AQ9HCS5 686 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-205ENST00000471862 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
COL4A3-205ENST00000471862 TMX2Q9Y320 296 aa13.84□□□□□ -0.19
COL4A3-205ENST00000471862 M0R2C6 588 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 SGPL1O95470 568 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 MX1P20591 662 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 GPR142Q7Z601 462 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 U2AF1L4Q8WU68 220 aaKnown RBP13.83□□□□□ -0.2
COL4A3-205ENST00000471862 SOCS4Q8WXH5 440 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
COL4A3-205ENST00000471862 HMGCRP04035 888 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
COL4A3-205ENST00000471862 ICA1Q05084 483 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 AAMPQ13685 434 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 MORN1Q5T089 497 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 TRIB2Q92519 343 aa13.82□□□□□ -0.2
COL4A3-205ENST00000471862 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms