RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 USP17L13C9JLJ4 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L11C9JVI0 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L18D6R9N7 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L22D6RA61 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L17D6RBQ6 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L19D6RCP7 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L20D6RJB6 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 CIAO1O76071 339 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 BAG3O95817 575 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 GH2P01242 217 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 HLA-DOAP06340 250 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 PTPREP23469 700 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 TLE2Q04725 743 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 FPGSQ05932 587 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 USP17L24Q0WX57 530 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 TFCP2Q12800 502 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 MAP3K12Q12852 859 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 NAA16Q6N069 864 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-204ENST00000471488 FAM9BQ8IZU0 186 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 SPATA5Q8NB90 893 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 TIFAQ96CG3 184 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-204ENST00000471488 UHRF1Q96T88 793 aaPredicted RBP8.47□□□□□ -1.05
HDAC1-204ENST00000471488 PRDM12Q9H4Q4 367 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 ZNF576Q9H609 170 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 SNRKQ9NRH2 765 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 EMILIN3Q9NT22 766 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 TMEM39AQ9NV64 488 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 THEGQ9P2T0 379 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 ZBTB21Q9ULJ3 1066 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 RABGAP1Q9Y3P9 1069 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 LTBP2Q14767 1821 aa8.47□□□□□ -1.05
HDAC1-204ENST00000471488 CLTBP09497 229 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 ADORA2AP29274 412 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 EPHB4P54760 987 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 SKIV2LQ15477 1246 aaKnown RBP8.46□□□□□ -1.06
HDAC1-204ENST00000471488 POTEEQ6S8J3 1075 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 NSUN4Q96CB9 384 aaKnown RBP8.46□□□□□ -1.06
HDAC1-204ENST00000471488 TANGO6Q9C0B7 1094 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 DHX36Q9H2U1 1008 aaKnown RBP8.46□□□□□ -1.06
HDAC1-204ENST00000471488 RPAP3Q9H6T3 665 aaPredicted RBP8.46□□□□□ -1.06
HDAC1-204ENST00000471488 HMG20BQ9P0W2 317 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 BTBD7Q9P203 1132 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 AKAP2Q9Y2D5 859 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 PTPRCP08575 1304 aa8.46□□□□□ -1.06
HDAC1-204ENST00000471488 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-204ENST00000471488 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-204ENST00000471488 MPHOSPH10O00566 681 aaKnown RBP8.45□□□□□ -1.06
HDAC1-204ENST00000471488 CNMDO75829 334 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 CYBAP13498 195 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 ITGB8P26012 769 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 USP5P45974 858 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 LRRC41Q15345 812 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 ATF7IPQ6VMQ6 1270 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 ZNF384Q8TF68 577 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 VTI1AQ96AJ9 217 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 NECAB3Q96P71 396 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-204ENST00000471488 ASB2Q96Q27 587 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 XPNPEP3Q9NQH7 507 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 TACC3Q9Y6A5 838 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 FLT1P17948 1338 aa8.45□□□□□ -1.06
HDAC1-204ENST00000471488 CDH23Q9H251 3354 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 GRXCR1A8MXD5 290 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 SEPT4O43236 478 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
HDAC1-204ENST00000471488 PGK1P00558 417 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 RARBP10826 455 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 PLCG2P16885 1265 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 VCAM1P19320 739 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 PBX2P40425 430 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 MRPS5P82675 430 aaKnown RBP8.44□□□□□ -1.06
HDAC1-204ENST00000471488 GRB14Q14449 540 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 TTC39AQ5SRH9 613 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 FOXP4Q8IVH2 680 aaPredicted RBP8.44□□□□□ -1.06
HDAC1-204ENST00000471488 ATXN2LQ8WWM7 1075 aaKnown RBP8.44□□□□□ -1.06
HDAC1-204ENST00000471488 SSH1Q8WYL5 1049 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 CABP5Q9NP86 173 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 SMC4Q9NTJ3 1288 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 SLC5A4Q9NY91 659 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 FBXO3Q9UK99 471 aa8.44□□□□□ -1.06
HDAC1-204ENST00000471488 DCDC2CA8MYV0 355 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 SRGAP3O43295 1099 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 RAD21O60216 631 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 MAP4K4O95819 1239 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-204ENST00000471488 ACRP10323 421 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 USP14P54578 494 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 DYNLL1P63167 89 aaKnown RBP8.43□□□□□ -1.06
HDAC1-204ENST00000471488 ABCB5Q2M3G0 1257 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 CERKLQ49MI3 558 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-204ENST00000471488 CATSPERGQ6ZRH7 1159 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 RNF180Q86T96 592 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 MIGA1Q8NAN2 632 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 ACER1Q8TDN7 264 aa8.43□□□□□ -1.06
HDAC1-204ENST00000471488 LENG1Q96BZ8 264 aaPredicted RBP8.43□□□□□ -1.06
HDAC1-204ENST00000471488 MOV10L1Q9BXT6 1211 aaKnown RBP8.43□□□□□ -1.06
HDAC1-204ENST00000471488 TSPYL2Q9H2G4 693 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms