RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 ELP3Q9H9T3 547 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 NID2Q14112 1375 aa10.75□□□□□ -0.69
PTPRE-207ENST00000471218 TLR2O60603 784 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 PFKFB2O60825 505 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 CRKP46108 304 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 HMGN5P82970 282 aaKnown RBP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 FGD1P98174 961 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 PPARAQ07869 468 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 TOB2Q14106 344 aaPredicted RBP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 SGMS1Q86VZ5 419 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 ESR2Q92731 530 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 GBP4Q96PP9 640 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 PTPN18Q99952 460 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 TDRD3Q9H7E2 651 aaKnown RBP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 DCP1AQ9NPI6 582 aaPredicted RBP10.74□□□□□ -0.69
PTPRE-207ENST00000471218 HTTP42858 3142 aa10.74□□□□□ -0.69
PTPRE-207ENST00000471218 SPDYE5A6NIY4 337 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 EN2P19622 333 aaPredicted RBP10.73□□□□□ -0.69
PTPRE-207ENST00000471218 PDE4BQ07343 736 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 VGLL4Q14135 290 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.73□□□□□ -0.69
PTPRE-207ENST00000471218 TBC1D10CQ8IV04 446 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 MIGA1Q8NAN2 632 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 ZDHHC15Q96MV8 337 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 NBPF3Q9H094 633 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 FZD1Q9UP38 647 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 TAF6LQ9Y6J9 622 aa10.73□□□□□ -0.69
PTPRE-207ENST00000471218 ECM29Q5VYK3 1845 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 DDX11L8A8MPP1 907 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 TCP10L2B9ZVM9 353 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 PRC1O43663 620 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 GJA5P36382 358 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 PPATQ06203 517 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 PPIL2Q13356 520 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 Q6ZUG5 572 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 BRI3BPQ8WY22 251 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 TEPSINQ96N21 525 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 AATFQ9NY61 560 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRE-207ENST00000471218 TPCN1Q9ULQ1 816 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 SMC3Q9UQE7 1217 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPRE-207ENST00000471218 ATP6V1DQ9Y5K8 247 aa10.72□□□□□ -0.69
PTPRE-207ENST00000471218 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
PTPRE-207ENST00000471218 ERICH2A1L162 156 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 SSC5DA1L4H1 1573 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 SH2B2O14492 632 aaPredicted RBP10.71□□□□□ -0.69
PTPRE-207ENST00000471218 CDKL5O76039 1030 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 BTDP43251 543 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 LACTBP83111 547 aaPredicted RBP10.71□□□□□ -0.69
PTPRE-207ENST00000471218 ME3Q16798 604 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 PPP4R3BQ5MIZ7 849 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 CTR9Q6PD62 1173 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 IQCA1Q86XH1 822 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 BRF1Q92994 677 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 HTATIP2Q9BUP3 242 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 ZNF341Q9BYN7 854 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 TMEM39BQ9GZU3 492 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
PTPRE-207ENST00000471218 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
PTPRE-207ENST00000471218 ZNF646O15015 1829 aaPredicted RBP10.7□□□□□ -0.7
PTPRE-207ENST00000471218 LAMB1P07942 1786 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 CCDC196A0A1B0GTZ2 297 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 PRKAB2O43741 272 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 BRD1O95696 1058 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 USP5P45974 858 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 ANTXR2P58335 489 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 RHBDL3P58872 404 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 HAND2P61296 217 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 C12orf60Q5U649 245 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 CPLX2Q6PUV4 134 aaKnown RBP10.7□□□□□ -0.7
PTPRE-207ENST00000471218 TEX11Q8IYF3 940 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 SMARCC2Q8TAQ2 1214 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 TRIM47Q96LD4 638 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 WRNIP1Q96S55 665 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 UBAC1Q9BSL1 405 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 PCDHAC2Q9Y5I4 1007 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 NR2E3Q9Y5X4 410 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 PTCH2Q9Y6C5 1203 aa10.7□□□□□ -0.7
PTPRE-207ENST00000471218 RBBP6Q7Z6E9 1792 aaKnown RBP10.7□□□□□ -0.7
PTPRE-207ENST00000471218 BRCA2P51587 3418 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 NEDD4P46934 1319 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 USP17L12C9JPN9 530 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 USP17L21D6R901 530 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 CALM1P0DP23 149 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 CALM2P0DP24 149 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 CALM3P0DP25 149 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 CPA1P15085 419 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 PDIA3P30101 505 aaKnown RBP10.69□□□□□ -0.7
PTPRE-207ENST00000471218 DYNLL1P63167 89 aaKnown RBP10.69□□□□□ -0.7
PTPRE-207ENST00000471218 UBXN2AP68543 259 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 SYNE3Q6ZMZ3 975 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 ANKRD23Q86SG2 305 aa10.69□□□□□ -0.7
PTPRE-207ENST00000471218 TTC6Q86TZ1 520 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms